Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0795 ATGGCTTTGAGTACCCTCGATCAGCATCAATCAAACCTGAAGCATTTCTGTAAGATCTGTAAGAAAGGTTTCGGGTGTGGGAGGGCTCTTGGTGGGCATATGAGGGCGCACGGCATGGGGGAGGACAGCTGGACTGTGGATGACGATGAGGATGCCGAGAGTGACTGGGATGAAAAGCAGGGCGATGGCGGCGGCGGCAATGTGCCGTCGAGCACAAGGCGTTTGTATGCTCTGAGGACAAACCCTAACAGATTAAAAACCTGTAGTAAATGTGAGAATTGCGGTAAAGAGTTCCTGTCATGGAAGTCCTTTTTCGAACATGGAAATGGAAGGTGCACTAGTTCCGACCACATGGAGTCACCGGTTTCTTCCCCGATGTCTGACGGTGATGGCGATGACGACATGGGCCAGCGAGGTTGCGGTGGTTCGTATAAACGGAAGAGGTCAATTAGAGCCAAAGTTGGTACGTTAAGTGAAGAAGAGGACCTGGCGGCCAACAGTCTCATTATGTTATCTAACGCCACTGTTGATCCTCTCGCCATCACCGCCGTGGCAGAGCCCGAGGAATCTAGTGCGTCAGCGAGCAAAGATGAGGAGAGAAGAAACCCTATAAATTTTATCACCCCAATATCGTATTGTATTCCGGCCGTAGTGGATCACAAAGCCAAAACTACTCTGGTTCCCAAAGGCATGTTTGAATGCAAAGCATGCAAGAAAATCTTCAATTCTCATCAAGCGTTAGGTGGCCATAGGGCAAGCCACAAGAAAGTTAAAGGATGCTTCGCTTCGAGACTCGACCAACTCGAAGATAAAGACGATGATGTCATAACTCATGAAGAATTTCTCCCCACAAAATCAAACTCAATTGCTCATCATGATCATCATAATCCTTCCAATAATAATAATGGCACGTTGTTAATGGCGTCTTCGTCCAAAAGGAAATCCAAAGTTCATGAATGCTCGATATGTCACCGGACTTTCTCGTCGGGACAAGCCCTAGGAGGACACAAGAGGTGTCATTGGATCACACCAAATGCACCAGACTCATCCACATTGGCTAGGTTTCAGCAGTTTCAGGATCATATGGAACGAATGAATCAAATTCCCAAGTTTGATAACTCGGATCCGATCGATCTAAAGCTCGACCTCAACCTTCCTGCTCCTCTAGCCGACGATCTGGCACGGCGGACGGAGATTTTCTTACAGCCATGGTTAGGAGGAACGACAAAGCAGAAGGATCAAAATAATAATAACAATACAAATACTCATACTAATAGTCAATGTCACAGCCCCAGCAACCGTGAAGTCCACCACCACCAGCATCGCCATGAAAACGACAACGAAGACGACAAAAATAATAACAATAACAGCACTGTTTCCATGGAAAATGTTGAAGATGAAGCTGATAGTAAGGTGAAGAAGTTAGCTAAACTAAGTGAGTTAAAGGACATGAATTTAGGTGGAAGTTCTTCCCCATGGTTGCAGGTGGGGATTGGTTCAACTCCTGGGGTGGGAGCTGAACCATAA 1527 0.4656 MALSTLDQHQSNLKHFCKICKKGFGCGRALGGHMRAHGMGEDSWTVDDDEDAESDWDEKQGDGGGGNVPSSTRRLYALRTNPNRLKTCSKCENCGKEFLSWKSFFEHGNGRCTSSDHMESPVSSPMSDGDGDDDMGQRGCGGSYKRKRSIRAKVGTLSEEEDLAANSLIMLSNATVDPLAITAVAEPEESSASASKDEERRNPINFITPISYCIPAVVDHKAKTTLVPKGMFECKACKKIFNSHQALGGHRASHKKVKGCFASRLDQLEDKDDDVITHEEFLPTKSNSIAHHDHHNPSNNNNGTLLMASSSKRKSKVHECSICHRTFSSGQALGGHKRCHWITPNAPDSSTLARFQQFQDHMERMNQIPKFDNSDPIDLKLDLNLPAPLADDLARRTEIFLQPWLGGTTKQKDQNNNNNTNTHTNSQCHSPSNREVHHHQHRHENDNEDDKNNNNNSTVSMENVEDEADSKVKKLAKLSELKDMNLGGSSSPWLQVGIGSTPGVGAEP 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0795 508 ProSitePatterns Zinc finger C2H2 type domain signature. 17 37 IPR013087 -
Lele37g0795 508 ProSitePatterns Zinc finger C2H2 type domain signature. 234 254 IPR013087 -
Lele37g0795 508 SUPERFAMILY beta-beta-alpha zinc fingers 315 341 IPR036236 -
Lele37g0795 508 Pfam C2H2-type zinc finger 317 342 - -
Lele37g0795 508 Pfam C2H2-type zinc finger 232 256 - -
Lele37g0795 508 Pfam C2H2-type zinc finger 15 37 - -
Lele37g0795 508 ProSiteProfiles Zinc finger C2H2 type domain profile. 232 259 IPR013087 -
Lele37g0795 508 Coils Coil 461 481 - -
Lele37g0795 508 MobiDBLite consensus disorder prediction 407 431 - -
Lele37g0795 508 MobiDBLite consensus disorder prediction 406 471 - -
Lele37g0795 508 SMART c2h2final6 232 254 IPR013087 -
Lele37g0795 508 SMART c2h2final6 318 340 IPR013087 -
Lele37g0795 508 SMART c2h2final6 15 37 IPR013087 -
Lele37g0795 508 MobiDBLite consensus disorder prediction 483 508 - -
Lele37g0795 508 ProSitePatterns Zinc finger C2H2 type domain signature. 320 340 IPR013087 -
Lele37g0795 508 MobiDBLite consensus disorder prediction 432 451 - -
Lele37g0795 508 PANTHER OS02G0659100 PROTEIN 7 502 - -
Lele37g0795 508 ProSiteProfiles Zinc finger C2H2 type domain profile. 318 340 IPR013087 -
Lele37g0795 508 Gene3D Classic Zinc Finger 13 110 - -
Lele37g0795 508 MobiDBLite consensus disorder prediction 112 142 - -
Lele37g0795 508 MobiDBLite consensus disorder prediction 37 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0795 Lele-ChrLele37 17383958 17385484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0795 102 385 C2H2 Transcription Factor Family AT1G02040 33.559 7.11e-30 117