LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele37g0767	ATGCCGTCTCTGCTTCTGCACTTCCTGCTCAACCTTCCTCTTCTACTCTTCCTCTTCCCCATTCTCGCTTCTCCATCGGAGCTTGATACTCTCATGGCTATCAAATTCTCTATCGACCCACAGAACCGCTTTCTGACCTCATGGACTCCACATTCCGACCCATGTGGCGGCGCTTTCGAGGGCGTAGCATGCAACGAGCAAGGCCACGTCGTCAATATTTCGCTTCAAGGAAAGGGTCTCTCCGGCAGCATTCCGGCAGCCGTGGGTGATCTCAAGAGCTTGACGGGTCTCTATCTGCACTTCAATGCTCTGAGTGGGACGATACCCAAAGAAATTGCGAATTTGAGTGACCTGAACGATTTGTATCTCAATGTCAATAATTTCTACGGCGATATCCCTCGTGAGATTGGGAATATGTCTAATCTTCAAGTTTTGCAGCTTTGTTATAACAAATTTACTGGGAGTATTCCAACCGAATTGGGAAACTTGGAGAGACTTAATATTCTTGCTCTGCAATATAATCAGTTGAGTGGTGCAATTCCTGCTAGTTTGGGTCAATTGCAGTCACTAACGAGGCTGGATCTGAGCTTTAATAACCTTTTTGGCCCTATTCCAGTGAGACTAGCTGACGCGCCCAAACTAGAAAGACTTGATATTCAAAACAATTCTCTCTCAGGCATTGTCCCTGCAGCTCTTGGAAGACTGAGAGGCGGTTTTCAGTACATCAACAACCCTGGATTATGTGGGACTGAATTTACCAATTTGGTTGCTTGTAAATCTTTATTTGATCCTAGTAAGCCTGAACCATTTGAACCTGACAACTTTTCCACGAAGGATCTTCCAGCATCAGTTGAACCAAAGGATGAAAAGTGCAGTGATGAAACCCACTGTAAAAAATCATTGCAATATTCAAGAATGGCTTTGGTTTTTGGAGTGATTGGAATTATTGTTGCTTCCACAGTTTCTGGACTTTCCATGTTTGTGTGGTACCGTCTTCAAAAAAAGAAGATCAGAAGCACTATTGATGCTTCTGATAGCCGCATTAGCAGGAAAAATGCAGCTCCTTTGATCAGTTTGGAATATTCTAATGGGTGGGATCCATTAGCCAAAGGTAAAAGTACTTACTCCCAGGAAATTCTAGAGAGCTTTATGCTCAATCTAGAGGAGGTAGAACGTGCTACTCAGTGCTTCTCTGAGGTGAATTTGTTGGGGAAGAGTAATATGTCAGGAATTTACAGGGGAATTTTTAGAGATGGATCAGTTGTGGTTGTAAAATGCATCAACATGACCAGCTGCAAGTCTGATGAAACTGAGTTCTTGAAGGGGTTGAAGATATTGACCTCATTAAAACACGAAAATCTCATTCGCTTGAGAGGGTTTTGCTGTTCTAAAGGCAGGGGAGAGTGCTTTCTCGTTTATGATTTTGCCCCAAATGGGAGTTTGTCTCAGTATTTGGATCTCAAGAAAAGTGATACTAAGATTCTGGAATGGTCTACCAGAGTATCCATCATCCATGGTATTGCTAGAGGTATTGGTTATCTGCATGGAAAGAAGCGAAGAAAGCAGGCTCTAGTTCACCAGAATATATCAGCTGAAAATGTGCTTCTTGATGCACATTACAATTCATTACTTGGAGATTCAGGATTGCACAAACTCCTTGCTGATGATGTTGTCTTCTCCACCCTTAAAGCTTCTGCTGCCATGGGATACCTTGCTCCAGAATACGCAACCACCGGTTGTCTAACCGAAAAAAGTGACATATATGCTTTCGGGGTGATAGTTTTCCAGCTTCTTACTGGAAAGAGCGATATCGATATTACTCAATTATATCATTACCAGGCAGAAGCATCTGGTTTTAATGATATGGTTGATGGAAACCTTGAAGGGAGATTTTCGGAATCAGAGGCAGCTAAACTAGGGAGCATTGCTCTACTTTGCACAGATGAATCGCCCCATGAACGACCATCTATGGATCATGTAATGCAAGAAATGTCTGAGAAGTGA	2004	0.4281	MPSLLLHFLLNLPLLLFLFPILASPSELDTLMAIKFSIDPQNRFLTSWTPHSDPCGGAFEGVACNEQGHVVNISLQGKGLSGSIPAAVGDLKSLTGLYLHFNALSGTIPKEIANLSDLNDLYLNVNNFYGDIPREIGNMSNLQVLQLCYNKFTGSIPTELGNLERLNILALQYNQLSGAIPASLGQLQSLTRLDLSFNNLFGPIPVRLADAPKLERLDIQNNSLSGIVPAALGRLRGGFQYINNPGLCGTEFTNLVACKSLFDPSKPEPFEPDNFSTKDLPASVEPKDEKCSDETHCKKSLQYSRMALVFGVIGIIVASTVSGLSMFVWYRLQKKKIRSTIDASDSRISRKNAAPLISLEYSNGWDPLAKGKSTYSQEILESFMLNLEEVERATQCFSEVNLLGKSNMSGIYRGIFRDGSVVVVKCINMTSCKSDETEFLKGLKILTSLKHENLIRLRGFCCSKGRGECFLVYDFAPNGSLSQYLDLKKSDTKILEWSTRVSIIHGIARGIGYLHGKKRRKQALVHQNISAENVLLDAHYNSLLGDSGLHKLLADDVVFSTLKASAAMGYLAPEYATTGCLTEKSDIYAFGVIVFQLLTGKSDIDITQLYHYQAEASGFNDMVDGNLEGRFSESEAAKLGSIALLCTDESPHERPSMDHVMQEMSEK	667

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele37g0767	667	ProSiteProfiles	Protein kinase domain profile.	397	667	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele37g0767	667	Pfam	Leucine rich repeat N-terminal domain	25	65	IPR013210	-
	Lele37g0767	667	SUPERFAMILY	Protein kinase-like (PK-like)	375	662	IPR011009	-
	Lele37g0767	667	Pfam	Protein tyrosine and serine/threonine kinase	401	663	IPR001245	GO:0004672\|GO:0006468
	Lele37g0767	667	Pfam	Leucine Rich Repeat	213	234	IPR001611	GO:0005515
	Lele37g0767	667	FunFam	Protein NSP-INTERACTING KINASE 2	369	475	-	-
	Lele37g0767	667	PANTHER	LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED	81	665	-	-
	Lele37g0767	667	Pfam	Leucine rich repeat	140	200	IPR001611	GO:0005515
	Lele37g0767	667	SUPERFAMILY	L domain-like	25	236	-	-
	Lele37g0767	667	CDD	STKc_IRAK	403	666	-	-
	Lele37g0767	667	FunFam	Leucine-rich repeat receptor-like kinase	26	135	-	-
	Lele37g0767	667	Gene3D	Ribonuclease Inhibitor	22	260	IPR032675	-
	Lele37g0767	667	Gene3D	Phosphorylase Kinase; domain 1	368	475	-	-
	Lele37g0767	667	FunFam	Protein NSP-INTERACTING KINASE 2	137	259	-	-
	Lele37g0767	667	MobiDBLite	consensus disorder prediction	270	291	-	-
	Lele37g0767	667	Gene3D	Transferase(Phosphotransferase) domain 1	476	667	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele37g0767	Lele-ChrLele37	16795913	16799437	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele37g0767	14	510	Miscellaneous Gene Families	AT4G22730	49.237	9.22e-177	512

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-IV	Lele37g0767		PK_Tyr_Ser-Thr	1.8e-36	CL0016