Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0748 ATGTCCGCCTCTTCCACTGCCTCCTTTTCACCGGACCAGCAGCACCTCCTCTCTCCCTCCGACCAGCTCTGTTATGTCCATTGCGACTTCTGTGACACTGTCCTCGCGGTGAGTGTTCCTTGCTCCAGTTTGTTCAAGACCGTCACTGTACGATGTGGCCATTGCACCAACCTTCTCTCTGTCAATATGCGTGGCCTGCTTCTTCCTTCTGCCAATCATCAGCTTCATCATCTTGGGCACTCCTTCTTCACCCCCCAAAATCTTCTGGAGGATATTCGAAGTGCACCTTCATCAAATATGGTGATGAATCAGCTACAGAATAACCCAAATGATTCTGTTATGACTATGAGCACTATGCGAGCACGACCTGAGGAAATCCCTAAGCCTCCACCGGCTAACAGACCTCCAGAGAAGAGACAGAGAGTTCCATCTGCTTACAATCGCTTCATCAAGGACGAGATCCAACGTATCAAAGCTGGGAATCCTGATATAAGCCACAGAGAGGCTTTCAGTGCTGCGGCAAAGAATTGGGCCCATTTCCCCCATATCCACTTCGGACTGATGCCTGATCATCAACCCGTGAAGAAAGCTAATGTCCGCCAGGAAGGAGAGGACGTGCTTATGAAAGATGGGTTTTTCGCTCCAGCAAACGTAGGGGTCTCCCCATTTTAG 672 0.5 MSASSTASFSPDQQHLLSPSDQLCYVHCDFCDTVLAVSVPCSSLFKTVTVRCGHCTNLLSVNMRGLLLPSANHQLHHLGHSFFTPQNLLEDIRSAPSSNMVMNQLQNNPNDSVMTMSTMRARPEEIPKPPPANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANVRQEGEDVLMKDGFFAPANVGVSPF 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0748 223 Gene3D High mobility group box domain 126 183 IPR036910 -
Lele37g0748 223 MobiDBLite consensus disorder prediction 121 143 - -
Lele37g0748 223 SUPERFAMILY HMG-box 132 181 IPR036910 -
Lele37g0748 223 FunFam Axial regulator YABBY 132 204 - -
Lele37g0748 223 Pfam YABBY protein 19 187 IPR006780 GO:0007275
Lele37g0748 223 PANTHER PROTEIN YABBY 6-RELATED 5 199 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0748 Lele-ChrLele37 16245620 16248926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0748 30 221 C2C2-YABBY Transcription Factor Family AT4G00180 63.380 6.49e-71 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Lele37g0748 YABBY 1.8e-74 CL0114