Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0672 ATGACACTGGTCAAGCTCCGACAAGCTGGGTTTTTCAAACTTGATCACCTTCCTCCGGATTCCGAGAAATTTGATAAATTATTTCTGGGTGTTTGGATTCTGAGAAACTTGTTTCTGGGCATTTCTCGCTGTGGATTTTGGAAGCAATTTGCGGGTGAGACAGAGACTCCGGAGCTTCAAGACGAAGCTACATGGAGTTGGTTTCTCAATCTTAAAAGACAACAAAAAATGGTGGAGCAACGTGGAGAAGATGATATTAACTATTCCACAGAAGACTGGTTCTTGCGAGCTCAAGAACTCGTGCCGATTGCAGTTAACAAGTCGAAAGAAGAGGTGAAGGGCTTTTCTGGTAGATGGAAAGTAATTGTTTCAAAGATAGAACAAATCCCATCATGTTTATCAGATTTGTCTAGCCATCCTTGTTTCTCCAAGAATTCTCTTTGTAAGGAGCAATTGCAGGCCGTGTCGAAGACACTCGAGGAAGCCATTGATTTAGCCGAGTTATGCGCGAAGGAGAGGTACGAAGGTAAGCTTCGAATGCAGAGTGATCTCGACGCTTTATCGGGGAAATTGGATTTGAATTTACGAGATTGTAGGCTATTGATCAAGACTGGTGTCCTTGGTGAGTCTACTTTTTCTTTCGGTTTGTCCGATGCGAAACAAGGGAACGATGTAAGAGAATTGTTTGCGCGCCTTCAGATTGGTGACTTGGAGGCGAAGCATAGGGCTATAGACAGTCTTATTGAAGCAATGAAGGAAGAACAGAGTGTTATGTCTGTTATAGGAAGAAGCCAAATTGCTTCTTTAGTTCAATTGTTAATGGTTACTTGTAATACGATAAGGGAAAAGGCGGTTACTGTCATATGTTGTCTTGCGGAATCTGGGAAGAACTCCGAGAATTGGCTTGTTTCTGAAGGAGTTTTGCCGCCTCTGATTCGGCTTATCGAATCAGGTGGGGCTATTGGGAGAGAGAAGGCTGCAATGTGTCTTCAGAGGTTGTCCATGTCGAAGGAATTAGCCGGAGAAATCGTTGGACATGGCGGGGTTAGGCCACTAATTGAGCTATGTCATAATGGAGATTCTGTGTCCCAATCTGCTGCTGCTTGTTCTTTGAAGAACATATCTTCTGTTCCTGAATTGAGACAATCTTTGTCTCAAGAAGGCATTGTGACGACAATGATCAATCTCCTTGATCATGGGATTCTGCTAGAATCCAAGGAATCTGCTTCAGAATGTTTACAGAATCTTACATCAAGCAATGAGAATCTAAGAAAGTCTGTTATATCAGAAGGTGGTGTTAAGAGCCTTCTTGCTTATCTTGATTCTCCAATCCCTCAAGAATCAGCCATCACGGCATTGAGGAATCTAGTCGGATCAATTGGCGAGCGAGATTTGATCTCATTAGGCCTCCTTCCTCGTTTGATCCACAAGATAAACTCGGGATCTTCCGGAGCTCAGCAGGCTGCTGTGTCAACACTATGTCGAATTTTGATCTCATCAGATATGAAGAAACTGGTGGCCGAGGCCGGATTCATCCCGCTGCTAATCAAAATGCTGGAATCTAAATCGAACAGCACGAGAGAATTCGCAGCGCAAGCCATCGCGAGCTTGATGACGGTTACACAAAATCGCAGGGAGGCGAGGAGGAATGATAAGAGTGTGCCAAATCTAGTTCAGTTGCTTGATCCAAGTCCACATAATACTGCAAAGAAATATGCAATTTCTTCATTTGAGTTTTGA 1740 0.4351 MTLVKLRQAGFFKLDHLPPDSEKFDKLFLGVWILRNLFLGISRCGFWKQFAGETETPELQDEATWSWFLNLKRQQKMVEQRGEDDINYSTEDWFLRAQELVPIAVNKSKEEVKGFSGRWKVIVSKIEQIPSCLSDLSSHPCFSKNSLCKEQLQAVSKTLEEAIDLAELCAKERYEGKLRMQSDLDALSGKLDLNLRDCRLLIKTGVLGESTFSFGLSDAKQGNDVRELFARLQIGDLEAKHRAIDSLIEAMKEEQSVMSVIGRSQIASLVQLLMVTCNTIREKAVTVICCLAESGKNSENWLVSEGVLPPLIRLIESGGAIGREKAAMCLQRLSMSKELAGEIVGHGGVRPLIELCHNGDSVSQSAAACSLKNISSVPELRQSLSQEGIVTTMINLLDHGILLESKESASECLQNLTSSNENLRKSVISEGGVKSLLAYLDSPIPQESAITALRNLVGSIGERDLISLGLLPRLIHKINSGSSGAQQAAVSTLCRILISSDMKKLVAEAGFIPLLIKMLESKSNSTREFAAQAIASLMTVTQNRREARRNDKSVPNLVQLLDPSPHNTAKKYAISSFEF 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0672 579 Pfam Armadillo/beta-catenin-like repeat 340 376 IPR000225 GO:0005515
Lele37g0672 579 Gene3D - 223 578 IPR011989 -
Lele37g0672 579 Pfam HEAT repeat 511 539 IPR000357 GO:0005515
Lele37g0672 579 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 85 575 - -
Lele37g0672 579 SMART arm_5 419 458 IPR000225 GO:0005515
Lele37g0672 579 SMART arm_5 336 376 IPR000225 GO:0005515
Lele37g0672 579 SMART arm_5 377 418 IPR000225 GO:0005515
Lele37g0672 579 SMART arm_5 499 539 IPR000225 GO:0005515
Lele37g0672 579 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 388 432 IPR000225 GO:0005515
Lele37g0672 579 SUPERFAMILY ARM repeat 224 571 IPR016024 -
Lele37g0672 579 Coils Coil 234 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0672 Lele-ChrLele37 5964647 5968369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0672 264 547 U-box Gene Family AT2G23140 24.739 2.04e-13 71.2