Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0662 ATGAGTTTTGGGGGTTTTCTCGACAATAACTGGGGCGGCGGAGGGTCTGGCGGCGGCGGTGCCAGAATCGTCGCCGATATTCCTTGCAGCAACGGCACAAACGATACTAGAATGGCGTCGGGTGGTTCAATCTCACAGGCTCGTCTTCTCTCACCACCTACCATGGCGAAATCCATGTTTAACTCTCCTGGGCTTTCTCTCGCACTTCAAACGAATCTTGACGAGCAACAAGTAGGGGATGAGAATAGAATGCCTGCTGCAGAGAGCTACGAGCCAAATGTTGGGACGAGAAGAAGCAGAGAAGAAGAACACGAAAGCAGATCTGGTAGTGATAATATGGAAGGCCCCATTTCCGGCGACGAACAGGACGCCGCCGACATTCCTCCCAGGAAAAAACGCTATCACCGGCATACCCCTCAGCAAATACAAGAGCTCGAAGCTCTATTCAAGGAGTGTCCTCACCCAGATGAGAAACAAAGACTAGAACTTAGCAGAAGGCTTTGCTTAGAGACCAGGCAGGTGAAATTTTGGTTCCAAAATCGAAGAACCCAGATGAAGACCCAATTGGAGCGCCATGAAAACAGTTTGCTGAGGCAAGAGAACGATAAACTGAGAGCAGAGAACATGTCTATAAGAGAAGCCATGAGGAATCCGATATGTTCAAATTGTGGAGGCCCAGCGATAATAGGCGAGATTTCACTAGAAGAACAACACCTAAGGATTGAAAACGCTCGATTGAAAGATGAACTAGACCGAGTTTGTGCTCTTGCGGGAAAGTTCCTCGGCCGACCCATTTCTTCATTAACCAGTCCGATTGGTCCTCCATTGCCGAACTCAAGCTTAGAACTCGGAGTCGGCATCAACGGGTTCGGTGGTATAAGCACCGTGTCTCCTTCAACATTACCTTTAGGGCCTGCAGATTTCGGATTTTCCAACCAATTAGCGATGGTTCCTCCGGCAACAACAACGTCGACAACGACTATGACAAGACCATCGGGAGCTTTGGTTGTCGGCGGTGGCGGGCTTGATAGGTCGATAGAGAGGTCTATGCTTCTGGAGCTTGCTTTGGCGGCCATGGACGAGCTGGTGAAGATGGTTCATACAGATGAACCTCTCTGGTTAAGAAGCTTAGAAGAAGGAGGAAGAGAGATTCTGAACCATGAAGAATACATGAGAACATTCAGTAATCCTTGCATTGGAATGAAACCTAATGGCTTCGTCTCCGAAGCTTCTAGAGAAACTGGAATGGTCATCATCAACAGCTTGGCCCTTGTTGAAACGCTCATGGATTCAAATCGATGGGCAGAAATGTTTCCTTGTTTGATTGCAAGAACCTCCACCACAGAAGTAATCTCCAGTGGAATAAATGGAACCAGAAATGGTGCACTGCAACTGATGCATGCGGAGCTTCAGGTTCTATCGCCATTGGTACCAGTTCGAGAGGTGAATTTTCTTCGATTCTGCAAGCAACACGCAGAGGGGGTGTGGGCTGTGGTCGATGTTTCCATTGAAAGCATTATTCGAGAAGCTTCTTCTGGAGCTCCATGTTTTGTGAACTGTAGAAGGCTTCCTTCTGGGTGCATTGTTCAGGATATGCCAAATGGGTACTCCAAGGTGACATGGGTGGAACATGCAGAATACGATCCAAGTCAAGCCCACCAACTCTATAGACCCTTGTTGAGCTCCGGCATGGGCTTCGGTGCTCAACGGTGGGTCGCCACCCTCCAACGCCAATGCGAGTGCCTCGCCATCTTAATGTCCTCCTCCGTCCCCTCTCGAGATCACACCGCTGCCATAACGGCCGGTGGCCGGCGTAGCATGTTGAAGCTTGCGCAGCGAATGACCAACAATTTCTGCGCCGGAGTTTGCGCTTCCACGATGCATAAATGGAACAAGTTGAATGCCGGCAACGTGGACGAGGACGTCCGGGTGATGACTCGAAAGAGTGTGGACGATCCCGGTGAGCCTCCGGGGATAGTCTTAAGTGCAGCCACCTCCGTTTGGCTTCCGGTTACACCCCAAAGACTGTTCGATTTCCTACGTGATGAACGTCTGAGAAGCGAATGGGACATACTCTCAAACGGCGGGCCCATGCAAGAGATGGCCCACATCGCCAAAGGCCAAGACCATGGCAATTGCGTCTCTCTCCTGCGGGCCAGTGCGATGAATGCAAACCAGAGTAGCATGCTGATCCTGCAGGAGACATGTATAGACGCGGCGGGCTCGCTTGTAGTGTACGCGCCGGTGGATATCCCGGCCATGCATGTGGTGATGAACGGTGGCGACTCGGCTTATGTGGCGTTGTTGCCTTCCGGGTTCGCCATAGTTCCGGATGGACCGGGCTCGCGTGGGTCCCAAACGACGGCGAGCAACGGGAACGCGAACGGCAACGGGGGTGTGAATGAGAGGGTAAGTGGGTCCCTCTTGACGGTGGCTTTTCAAATCCTCGTGAATAGCCTCCCTACGGCGAAGCTCACGGTGGAGTCGGTGGAGACGGTGAACAACCTCATCTCGTGCACCGTTCTGAAAATAAAGGCCGCTCTACCCTGTGAAAGCTGA 2559 0.5158 MSFGGFLDNNWGGGGSGGGGARIVADIPCSNGTNDTRMASGGSISQARLLSPPTMAKSMFNSPGLSLALQTNLDEQQVGDENRMPAAESYEPNVGTRRSREEEHESRSGSDNMEGPISGDEQDAADIPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIREAMRNPICSNCGGPAIIGEISLEEQHLRIENARLKDELDRVCALAGKFLGRPISSLTSPIGPPLPNSSLELGVGINGFGGISTVSPSTLPLGPADFGFSNQLAMVPPATTTSTTTMTRPSGALVVGGGGLDRSIERSMLLELALAAMDELVKMVHTDEPLWLRSLEEGGREILNHEEYMRTFSNPCIGMKPNGFVSEASRETGMVIINSLALVETLMDSNRWAEMFPCLIARTSTTEVISSGINGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIESIIREASSGAPCFVNCRRLPSGCIVQDMPNGYSKVTWVEHAEYDPSQAHQLYRPLLSSGMGFGAQRWVATLQRQCECLAILMSSSVPSRDHTAAITAGGRRSMLKLAQRMTNNFCAGVCASTMHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVTPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAMNANQSSMLILQETCIDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPGSRGSQTTASNGNANGNGGVNERVSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVLKIKAALPCES 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0662 852 CDD START_ArGLABRA2_like 348 580 - -
Lele37g0662 852 Gene3D - 118 204 - -
Lele37g0662 852 SUPERFAMILY Bet v1-like 346 581 - -
Lele37g0662 852 MobiDBLite consensus disorder prediction 781 798 - -
Lele37g0662 852 ProSitePatterns 'Homeobox' domain signature. 163 186 IPR017970 GO:0000981|GO:0006355
Lele37g0662 852 CDD homeodomain 130 188 IPR001356 GO:0003677
Lele37g0662 852 SMART START_1 353 581 IPR002913 GO:0008289
Lele37g0662 852 ProSiteProfiles START domain profile. 344 584 IPR002913 GO:0008289
Lele37g0662 852 Coils Coil 182 217 - -
Lele37g0662 852 FunFam Homeobox-leucine zipper protein HDG1 118 204 - -
Lele37g0662 852 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 130 848 IPR042160 -
Lele37g0662 852 MobiDBLite consensus disorder prediction 81 126 - -
Lele37g0662 852 MobiDBLite consensus disorder prediction 94 110 - -
Lele37g0662 852 Pfam Homeodomain 131 186 IPR001356 GO:0003677
Lele37g0662 852 SUPERFAMILY Bet v1-like 603 825 - -
Lele37g0662 852 SMART HOX_1 129 192 IPR001356 GO:0003677
Lele37g0662 852 Pfam START domain 353 581 IPR002913 GO:0008289
Lele37g0662 852 ProSiteProfiles 'Homeobox' domain profile. 128 188 IPR001356 GO:0003677
Lele37g0662 852 SUPERFAMILY Homeodomain-like 116 188 IPR009057 -
Lele37g0662 852 FunFam Homeobox-leucine zipper protein GLABRA 2 353 580 - -
Lele37g0662 852 MobiDBLite consensus disorder prediction 779 798 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0662 Lele-ChrLele37 5771975 5777851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0662 1 852 Homeobox Transcription Factor Family AT3G61150 64.965 0.0 1041
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele37g0662 START 2.9e-54 CL0209