Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0660 ATGGAACTGCAGGCGCATATTTCAGGTCCGGTAACTAATCAAGCAGGGTCTCAGCTGCCTGGACTGGCTCAGCCAAATGGAAATGCCCTCCCCCCTCAGATACCAAATTTAGGGGGTATTCCCCGTTCAACCATAAATATGGACCCTGAATTTCACCGAGCACGTTTGCATATGCAGGAGAAGATCTATGATATGCTATTGCAGCGGCAGCAGCATCCGGTTACAGAACTTAATAGAATAAAGTATAGGGATTTTGCCAAACGCCTGGAGGAGGGCATGTTGAGATCTGCACCTTCTAAGGAAGAGCACTTGAACATGGAAACATTAGAGAGCCGTTTGGTGAATTGCATCAAACGATCATCTACGAGTAATCATAATCAACATTATAGGAGTAATCATAACCAACAATATCCCCAGATTGTCAGCTCTTCTCTAGTAGGTACAATGATACCAACACCTGGCATGTCGTATGTTGTGAATTCAAGCATGGCCTCTTCATCTTCTGTAGAGGTCCCAATGATTGCATCCAGTGGATGTAATAGCATAGCATCTTCATCTATCAATAGTGGAAACATGTATCTACCCAGCAACTTGCATGGGAATTCCTTAAGTAAATGTGATGGTTTGGCAAATGGCTATCAGCCGTCTTCTACCGGCTTTTCTGTTGGTTCCGGGGGAAACATGTCATCAATCGGTGTGCAGAGAATTGCAAGTCAGATGATTCCCTCTCCTGGATTCACTGGAAGCAATCACTCATACATGGATATAGAATCTTCTAATAATAGCAGTGGCTTCTCCAATGTTGATTCTACTATGGTATCACAGTCACAGCAGAAGCAGCTTGTTGGTGGCCAAAACAATAATGTGATGCAGAACCTTGGCAGCCAAGTGGGTAGTGGAATGAGGCCTGGTTTACAACAAAAACCTTTTGAATACACAAATGGAGCTATAAGTAGTGGATTAGGCTCAATTGGAAATAATATGCAAGCTGCGAATGAATCTGGAACTACTGATGGCTATGCCACAACTTATGGTAACTCCCCTAAACAGTTGCAGCAGCACTTTGATCAAAATCAGCAACCACCGGTGCAGGGTGATGGTTATGGATTAAATAATTTTGACTCTTTTGCTTCTGGAAACTTTTATTCATCTGCTACATCTTCTGGATCTATCATGAGCTGTCAGAACATGAATTCAGCAAAATTGCCTGCTATATCCAAAACCAACTCTCTGATTAGTAGTCATTCGAGTTTGCACGGTATGCAGCAGGCTGCTCTTTTGAAGTCTCAAGCAATTAATCAGTTGGAAAAGTTGAATTTTCAGCCTTCTTTGACTTCAAGAGATGGCCTATTGCATCATCAACAGCAATATCAGCAACGGCCTCATCAATTTCAACAGTCAGAACAATATGTGCAACAGCAATTTCAACGCCAGAAGCCTCAGCATTTGGTCAATAATGATGCTTTTAGTCAGCCTCAGGCGGCATCCAATTTAGAAAGCCGAGTGAAGTCTGAGCCTGGAGTCAAACATCATCAAGAAGTGCTTAATTCACAGCTTCCTGGACAGTTTCATATTTCTGGGATGCAAAATCAGTTTCAGCAGAAAACTGCTGAAGATTGCTCTAAGAATGCTCAACATCTTTCTTTTCCACCTGGTCAGAATGATTTATCCATGAGAGCACCTCAGAATTCGCAACAAATGCTACACCCTCAATATTTGACTTCACAGTCTGGAAATAATTTTAGCTGGCCTTCGGTTGGAACACAGTCTAAACCTGCACATGCAAATCAATGGAATTCTCGATCACAGGATGTCAAACACATAACAGGGAATACATCACAAGAGCAGCTTGTCCAGTCTGATTTCCATCAACGAGTATCAAGGCAAGATGAAGCTCAATGCAATAATTTATCATCAGATCTATCTGTTGTTGGGCAAGCTGTTGCTTCTAGAGGCTCATCTGAGCCACAAGATTCAGGTGTTGCTATTAAAAAAGCACACAGGAACCAACAGAGGTGGCTTCTATTTCTGCTTCATGCCCGCCGATGTCCTGCCCCTGAAGGACAATGCCAAGAGCGTTTTTGTTATAGTGCTCAGAAGTTATGTAGACACATAGAAGGATGTGATCTAACTCATTGTCCATATCCCCGCTGTCATCATACCAGGCTGTTGCTTCGTCATTTCAGAAACTGCAAGGATCCTTGTTGCCCTGTTTGTGTCTTTGTTCGCAATTATCGACTTTCATTTAAACTTAAGTCTCATATTCAGCCAGTTAATAATTCAGGCATGCCAGTTGCTGTTCATGGATCCTGCAAATCCTATGATACTGAAGTTCCATCACCTAGTTTGATCCCAAAGCCAGTACCTGTGATTGAAAATTCAGAAGACCTGCAGCCATCTCAAAAACGTATGAAGATTGAGCAGAGTACCCATTCCTTAAGTTCCAAGAATGACAACTCTGCTATGTCATTTTCTGCGAACTGTCATTCCGATGTTTCCAATGGTGCTCAGTGCGAAGATTATCCCCATTGTGAGACATCTATTCCAATTAAATCTGAGCTTATAGAAGTCAAGGAAGAATTTCTGGTACATTCGGCAAATGAGAATCTTAGTGAAGTTAATGCAAGTAACATGGAAGGTGGAGGGCCTACTAGCGAACCTGTCACATTTAATGATTCCGGGCCAGAAAATATTAAAACAGAGAAAGAAAGGGGACAAGATAAACCACTAAGTGTGACCCAGCCATCTGAAAATGCATTGGGTACCAAATCAGGTAAGCCCAAAATAAAGGGGGTCTCATTGATTGAACTATTCACTCCAGAGCAAGTCAGGGAACATATCACCGGCCTTAGGCAATGGATTGGCCAAAGCAAAGCAAAAGCAGAGAAGAATCAAGCAATGGAGCATTCAATGAGTGAGAATTCCTGTCAGTTGTGTGCTGTAGAGAGGCTTACTTTTGAACCACCTCCCATTTATTGTTCAACTTGTGGTGCTCGTATTAAACGAAATGCTATGTATTATACTATGGGTGCTGGTGACACGCGACATTATTTTTGTATTCCATGCTATAATGAGGCTCGTGGAGACAGCATTGTTGTTGATGGAACGACCATTCCTAAGGGAAGGCTGGAGAAGAAGAAAAATGATGAAGAAACTGAGGAAGGGTGGGTTCAATGTGATAAATGTGAAGCTTGGCAACATCAAATTTGCGCTTTATTTAACGGTCGAAGAAATGATGGGGGACAAGCTGAATACACTTGCCCTAACTGCTATATTCAAGAGGTAGAAAGAGGAGAGCGCATACCGTTACCTCAAAGTGCTGTTCTTGGGGCCAAGGATCTGCCTAGAACGATTCTGAGCGACCACATAGAGCAACGGCTGTTTAGGAGACTAAAACAGGAGAGACAGGAGAGGGCAAGGCTTCAAGGAAAAAGTTATGATGAGGTGCCTGGGGCTGAGTCAATTGTTATAAGAGTTGTGTCATCTGTAGACAAGAAGTTAGAAGTGAAACAGCGTTTTCTGGAAAATTTTCAGGAAGAAAATTACCCAACGGAATTCCCTTACAAATCAAAGGTAGTTTTGTTATTTCAGAAGATTGAAGGTGTGGAAGTATGTCTGTTTGGCATGTATGTGCAAGAATTTGGATCTGAATGCCAATTTCCTAATCAGCGACGAGTATATCTTTCATATCTTGATTCTGTGAAGTATTTTCGGCCTGAGGTTAAAGCAGTGACTGGAGAGGCTCTTCGGACATTTGTTTACCATGAAATTCTAATCGGGTACCTTGAATATTGCAAGAAACGTGGTTTTACAAGTTGTTATATCTGGGCATGTCCTCCATTGAAGGGTGAAGATTATATATTGTATTGTCATCCAGAAATTCAAAAAACTCCAAAATCCGATAAGCTTCGGGAATGGTACCTTGCAATGTTAAGAAAAGCTTCCAAGGATGATATTGTGGTCGATCTCACCAATTTGTATGACCATTTCTTTGTATCTACTGGTGAATGTAGAGCAAAGGTTACTGCCGCAAGACTTCCATATTTTGATGGAGACTACTGGCCAGGGGCTGCAGAGGATTTGATTTATCAGCTCCGTCAAGAAGAAGATGGCAGAAAACAGAATAAGAAAGGAACTATGAAGAAAACTATAACGAAAAGGGCCTTAAAGGCATCTGGTCAGACAGATCTTTCTGGAAATGCCTCGAAGGATCTACTCCTAATGCATAAACTTGGTGAAACCATTAGCCCGATGAAGGAAGATTTTATCATGGTTCATTTGCAGCATTCATGCAGCCACTGTTGCATTTTAATGGTGTATGGCAACCGTTGGGTTTGTAACCAGTGCAAGAATTTTCAGATTTGTGACAAGTGTTATGAAGCAGAACAAAAACTTGAAGAAAGAGAAAGGCATCCTATAAATCATAAGGAAAAACATGCTCTTAACCGAATTGAAATTACTGATGTACCAGCTGATACAAAGGACAAAGATGAGATTCTTGAGAGTGAATTTTTTGACACTAGACAAGCATTTCTGAGTCTCTGCCAGGGAAACCATTATCAATATGATACTCTAAGGCGGGCCAAGCATTCATCAATGATGGTCCTTTATCATCTTCATAATCCAACTGCTCCAGCCTTTGTGACAACCTGTAAAATATGCTATCTTGACATAGAAACTGGTCAAGGTTGGCGATGTGAAGTTTGCCCTGAGTATGATGTGTGCAATTCTTGTTATCAAAAGGGAGGCATTGATCATCCACATAAGTTGACAAATCATCCATCACTGGCTGATAGTGATGCCCAAAACAAAGAAGCGAGACAGCTTCGAGTGTTGCAGCTGCGGAAAATGCTTGATCTTCTTGTGCACGCATCACAATGTCGTTCTCCACATTGCCAGTATCCCAATTGTCGAAAAGTGAAAGGGCTTTTCCGCCATGGAATTCTATGTAAAACACGTGCATCTGGGGGTTGTGTTCTTTGCAAGAAAATGTGGTATTTGCTTCAACTTCATGCTCGAGCTTGCAAAGAATCCCAGTGTCATGTACCACGATGCAGAGATTTAAGAGAACATCTAAGGAGATTACAGCAGCAGTCTGACTCTCGGCGAAGAGCAGCCGTAATGGAGATGATGAGACAGAGAGCAGCAGAAGTTGCCAACAATGCAGGATGA 5172 0.4194 MELQAHISGPVTNQAGSQLPGLAQPNGNALPPQIPNLGGIPRSTINMDPEFHRARLHMQEKIYDMLLQRQQHPVTELNRIKYRDFAKRLEEGMLRSAPSKEEHLNMETLESRLVNCIKRSSTSNHNQHYRSNHNQQYPQIVSSSLVGTMIPTPGMSYVVNSSMASSSSVEVPMIASSGCNSIASSSINSGNMYLPSNLHGNSLSKCDGLANGYQPSSTGFSVGSGGNMSSIGVQRIASQMIPSPGFTGSNHSYMDIESSNNSSGFSNVDSTMVSQSQQKQLVGGQNNNVMQNLGSQVGSGMRPGLQQKPFEYTNGAISSGLGSIGNNMQAANESGTTDGYATTYGNSPKQLQQHFDQNQQPPVQGDGYGLNNFDSFASGNFYSSATSSGSIMSCQNMNSAKLPAISKTNSLISSHSSLHGMQQAALLKSQAINQLEKLNFQPSLTSRDGLLHHQQQYQQRPHQFQQSEQYVQQQFQRQKPQHLVNNDAFSQPQAASNLESRVKSEPGVKHHQEVLNSQLPGQFHISGMQNQFQQKTAEDCSKNAQHLSFPPGQNDLSMRAPQNSQQMLHPQYLTSQSGNNFSWPSVGTQSKPAHANQWNSRSQDVKHITGNTSQEQLVQSDFHQRVSRQDEAQCNNLSSDLSVVGQAVASRGSSEPQDSGVAIKKAHRNQQRWLLFLLHARRCPAPEGQCQERFCYSAQKLCRHIEGCDLTHCPYPRCHHTRLLLRHFRNCKDPCCPVCVFVRNYRLSFKLKSHIQPVNNSGMPVAVHGSCKSYDTEVPSPSLIPKPVPVIENSEDLQPSQKRMKIEQSTHSLSSKNDNSAMSFSANCHSDVSNGAQCEDYPHCETSIPIKSELIEVKEEFLVHSANENLSEVNASNMEGGGPTSEPVTFNDSGPENIKTEKERGQDKPLSVTQPSENALGTKSGKPKIKGVSLIELFTPEQVREHITGLRQWIGQSKAKAEKNQAMEHSMSENSCQLCAVERLTFEPPPIYCSTCGARIKRNAMYYTMGAGDTRHYFCIPCYNEARGDSIVVDGTTIPKGRLEKKKNDEETEEGWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIQEVERGERIPLPQSAVLGAKDLPRTILSDHIEQRLFRRLKQERQERARLQGKSYDEVPGAESIVIRVVSSVDKKLEVKQRFLENFQEENYPTEFPYKSKVVLLFQKIEGVEVCLFGMYVQEFGSECQFPNQRRVYLSYLDSVKYFRPEVKAVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLAMLRKASKDDIVVDLTNLYDHFFVSTGECRAKVTAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTMKKTITKRALKASGQTDLSGNASKDLLLMHKLGETISPMKEDFIMVHLQHSCSHCCILMVYGNRWVCNQCKNFQICDKCYEAEQKLEERERHPINHKEKHALNRIEITDVPADTKDKDEILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCKICYLDIETGQGWRCEVCPEYDVCNSCYQKGGIDHPHKLTNHPSLADSDAQNKEARQLRVLQLRKMLDLLVHASQCRSPHCQYPNCRKVKGLFRHGILCKTRASGGCVLCKKMWYLLQLHARACKESQCHVPRCRDLREHLRRLQQQSDSRRRAAVMEMMRQRAAEVANNAG 1723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0660 1723 Gene3D TAZ domain 659 746 IPR035898 -
Lele37g0660 1723 MobiDBLite consensus disorder prediction 530 600 - -
Lele37g0660 1723 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1108 1544 IPR031162 GO:0004402
Lele37g0660 1723 ProSitePatterns Zinc finger ZZ-type signature. 1551 1578 IPR000433 GO:0008270
Lele37g0660 1723 MobiDBLite consensus disorder prediction 328 348 - -
Lele37g0660 1723 MobiDBLite consensus disorder prediction 873 895 - -
Lele37g0660 1723 MobiDBLite consensus disorder prediction 456 481 - -
Lele37g0660 1723 Gene3D - 1422 1484 IPR043145 -
Lele37g0660 1723 Gene3D TAZ domain 1602 1719 IPR035898 -
Lele37g0660 1723 SMART PHD_3 992 1091 IPR001965 -
Lele37g0660 1723 Pfam Histone acetylation protein 1148 1371 IPR013178 GO:0004402|GO:0006355|GO:0016573
Lele37g0660 1723 ProSiteProfiles Zinc finger ZZ-type profile. 1546 1598 IPR000433 GO:0008270
Lele37g0660 1723 ProSitePatterns Zinc finger PHD-type signature. 1019 1090 IPR019786 -
Lele37g0660 1723 SUPERFAMILY TAZ domain 666 745 IPR035898 -
Lele37g0660 1723 MobiDBLite consensus disorder prediction 803 820 - -
Lele37g0660 1723 MobiDBLite consensus disorder prediction 7 24 - -
Lele37g0660 1723 FunFam Histone acetyltransferase HAC1-like protein 1602 1719 - -
Lele37g0660 1723 SMART KAT11_2 1141 1438 IPR013178 GO:0004402|GO:0006355|GO:0016573
Lele37g0660 1723 SMART TAZ_2 1608 1686 IPR000197 -
Lele37g0660 1723 SMART TAZ_2 664 742 IPR000197 -
Lele37g0660 1723 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1047 1091 IPR013083 -
Lele37g0660 1723 MobiDBLite consensus disorder prediction 873 926 - -
Lele37g0660 1723 MobiDBLite consensus disorder prediction 796 820 - -
Lele37g0660 1723 Gene3D - 1545 1595 IPR043145 -
Lele37g0660 1723 Coils Coil 1124 1144 - -
Lele37g0660 1723 Gene3D - 986 1046 IPR038547 -
Lele37g0660 1723 SUPERFAMILY RING/U-box 1527 1593 - -
Lele37g0660 1723 SUPERFAMILY FYVE/PHD zinc finger 1053 1092 IPR011011 -
Lele37g0660 1723 FunFam Histone acetyltransferase of the CBP family 12 1422 1481 - -
Lele37g0660 1723 ProSiteProfiles Zinc finger ZZ-type profile. 1426 1489 IPR000433 GO:0008270
Lele37g0660 1723 Pfam TAZ zinc finger 671 739 IPR000197 -
Lele37g0660 1723 Pfam TAZ zinc finger 1615 1685 IPR000197 -
Lele37g0660 1723 PANTHER CBP/P300-RELATED 422 1714 IPR013178 GO:0004402|GO:0006355|GO:0016573
Lele37g0660 1723 FunFam Histone acetyltransferase HAC1 1545 1595 - -
Lele37g0660 1723 SUPERFAMILY TAZ domain 1607 1689 IPR035898 -
Lele37g0660 1723 SUPERFAMILY RING/U-box 1406 1486 - -
Lele37g0660 1723 Pfam Zinc finger, ZZ type 1548 1589 IPR000433 GO:0008270
Lele37g0660 1723 Pfam PHD-finger 1049 1091 IPR019787 -
Lele37g0660 1723 ProSiteProfiles Zinc finger TAZ-type profile. 1605 1688 IPR000197 -
Lele37g0660 1723 ProSiteProfiles Zinc finger TAZ-type profile. 661 742 IPR000197 -
Lele37g0660 1723 MobiDBLite consensus disorder prediction 1 31 - -
Lele37g0660 1723 CDD PHD_HAC_like 1018 1090 - -
Lele37g0660 1723 SMART zz_5 1425 1469 IPR000433 GO:0008270
Lele37g0660 1723 SMART zz_5 1545 1590 IPR000433 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0660 Lele-ChrLele37 5718164 5728814 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Lele37g0660 HAT_KAT11 7e-32 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0660 37 5718164 5728814 Lele37g0660 37 5718164 5728814 ECH
Lele37g0660 37 5718164 5728814 Lele39g0771 39 16278154 16288680 hybridization
Lele37g0660 37 5718164 5728814 Lele40g0578 40 5035354 5047572 hybridization