Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0633 ATGCATGAAGCAGCAATAATGGATTCAAAGAAGTCTAACAAGATCAGAGAAATCGTTAAACTTCAACAAATCCTCAAGAAATGGAAGAAGCTCGCAACTTCTTCTTCCTCCTACCCCACCGCGGCTGCCGCCACCGTATCCACCACCACCACCGGCAGTAACAAAGGCATAAAGTTCTTTTCAAGAAATATCTCATTCACCGACGTCGTTTCACCATCCTCCGCCAACAGCAGCGTCGTGGTGGTCCCCAGAAAAGGGTTTCTCGCCGTCTGCGTCGGAGAAGAGCTGAAGAGATTCACAATTCCAATGGAATACTTATCCCACCCAGCATTTCAGATTCTGTTAAGAGAAGCAGAAGAGGAATTCGGATTCCATCAAGAGGGAGTACTCAAGATTCCATGCCACGTGTCCTTGTTCGAGAAGGTATTAAAAGTGGTGGAAGAAAAGAGACCAATGTTCTTCGGAGAAGATAAGGATGGTTTTAGTAGTTGTTATGGTTCAGATTGTGATGTTGTTACTCCTACTCATCATCATGCTGTTCAAACATGTACATGA 555 0.4468 MHEAAIMDSKKSNKIREIVKLQQILKKWKKLATSSSSYPTAAAATVSTTTTGSNKGIKFFSRNISFTDVVSPSSANSSVVVVPRKGFLAVCVGEELKRFTIPMEYLSHPAFQILLREAEEEFGFHQEGVLKIPCHVSLFEKVLKVVEEKRPMFFGEDKDGFSSCYGSDCDVVTPTHHHAVQTCT 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0633 184 Pfam Auxin responsive protein 28 145 IPR003676 GO:0009733
Lele37g0633 184 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 61 142 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0633 Lele-ChrLele37 5315443 5315997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0633 7 177 Calmodulin-binding Proteins AT2G24400 48.387 2.82e-50 158
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0633 37 5315443 5315997 Lele37g0633 37 5315443 5315997 ECH
Lele37g0633 37 5315443 5315997 Lele39g0791 39 16965224 16965757 hybridization
Lele37g0633 37 5315443 5315997 Lele40g0568 40 4847240 4854814 hybridization