Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0619 ATGAAGCCAAGGGTTTGTGAGTTGTGTGGTGAGCAGGCGTACCTGTATTGTGCTTCTGATTCTGCATTTCTGTGTTTGAAATGCGATGGTAAGGTTCATGATGCCAATTTCTTAGTTGCTCGTCATATTCGAGAGATTCTGTGCTGCAATTGTATGTGTTTCGCCGGAAAGCAGGTTTCCGGTAGTGTGGCTCCGTTTGAAACTGTAACCTGTCGGTCTTGCTCGCCGGAGAATCTCTCCGATGGGGATGATTGTTTGTCTTCATCATCCACGTCGGCTTGCGTTTCAAGCACGGAGTCCTGTGCTACAGGTCTGAAGAAGATTCCGTTTCGGACGGAGACGGTGGTGTCGTCGGGTTCCGCAACGGATGAGAAGTGCCCGGCGGAAGGGAACAAGAATCCGTTACGGTGTCCGGCGGAGGAGGTTTTCGTGAATTGGAGCAGAAAGTTAGGGGTTAATGGAAATTGCGTGGCGGCGTTGGCTTCAACGGCGCTGGGTAAGCTAATGGCGGTGGTTCCGTTCAGAGTGGCGGTGGCGGCGTCGTTTTGGTTCGGCCTGAGATATTGTGGTGAGGGGCAGTTACGTACGGCTCAGAATTTGAGAAAGTTTGAGGAAATGTCGAAAGTGTCAGGCAAGGTGATCGTGGCGGCCGAGGAAAAGCTGACACGTGTCCTAAGACCCAAAAGAGCGAGGCTCGAATACGAAGAAGGATGGGCCGAGTGCTAA 726 0.5207 MKPRVCELCGEQAYLYCASDSAFLCLKCDGKVHDANFLVARHIREILCCNCMCFAGKQVSGSVAPFETVTCRSCSPENLSDGDDCLSSSSTSACVSSTESCATGLKKIPFRTETVVSSGSATDEKCPAEGNKNPLRCPAEEVFVNWSRKLGVNGNCVAALASTALGKLMAVVPFRVAVAASFWFGLRYCGEGQLRTAQNLRKFEEMSKVSGKVIVAAEEKLTRVLRPKRARLEYEEGWAEC 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0619 241 CDD Bbox1_BBX-like 5 44 - -
Lele37g0619 241 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Lele37g0619 241 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 5 103 - -
Lele37g0619 241 SMART bboxneu5 1 47 IPR000315 GO:0008270
Lele37g0619 241 Pfam B-box zinc finger 2 34 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0619 Lele-ChrLele37 5157180 5157905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0619 6 240 C2C2-CO-like Transcription Factor Family AT3G21150 34.008 2.68e-33 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele37g0619 zf-B_box 9.5e-06 No_clan