Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0617 ATGAAAACCCTAATCCTTCGAAAGCCTGGCGAAGGCCTAGATTTTGCTTTGGTTCAGTGGAGTTTCCGCAGACATCGTCAAAAAATGGGTGAGGAGGTTAAGACAATTGTTCCAGAGTCTGTGTTGAAGAAGAGGAAGAGAGAAGAGGAATGGGCATTGGCCAATGCACACGAGACTGAAGCCGCAAAAAAGAAGAGAGCTGAGAGCCGAAAGCTGATCTACAACAGAGCTAAGCAGTATGCCAAGGAGTATGAGGAGCAGGATAAGGAGTTGATTAGATTGAAACGTGAGGCAAAGCTGAAAGGTGGATTTTATGTAGATCCAGAGGCTAAACTATTGTTTATTGTTCGCATCCGTGGTATTAATGCCATGCATCCAAAGACCAGGAAGATCTTGCAACTCTTGCGTTTGAGGCAGATATTCAATGGCGTGTTTCTTAAAGTTAACAAGGCCACGATGAACATGCTTCACAGGGTTGAACCTTATGTGACCTATGGGTATCCAAACTTGAAGAGTGTAAGAGAACTTATTTACAAGAGGGGCTATGGTAAGATCAACAAGCAGAGAATTGCTTTAACTGACAATTCCATCATTGAGCAGGCACTGGGCAAGTATGGAATCATATCCACTGAAGATCTTATCCACGAGATCATAACAGTTGGACCTCACTTTAAGGAGGCCAACAACTTCCTTTGGCCCTTTAAACTCAAGGCGCCTTTGGGTGGACTAAAGAAGAAGAGGAACCACTATGTTGAAGGTGGTGATGCTGGAAACCGTGAGAATTACATCAATGAGCTCATTAGGAGAATGAACTAG 816 0.4363 MKTLILRKPGEGLDFALVQWSFRRHRQKMGEEVKTIVPESVLKKRKREEEWALANAHETEAAKKKRAESRKLIYNRAKQYAKEYEEQDKELIRLKREAKLKGGFYVDPEAKLLFIVRIRGINAMHPKTRKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKINKQRIALTDNSIIEQALGKYGIISTEDLIHEIITVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0617 271 Pfam Ribosomal protein L30p/L7e 113 163 IPR016082 -
Lele37g0617 271 Coils Coil 77 101 - -
Lele37g0617 271 FunFam 60S ribosomal protein L7 217 271 - -
Lele37g0617 271 TIGRFAM uL30_euk: 60S ribosomal protein uL30 38 271 IPR005998 GO:0000463|GO:0003735|GO:0022625
Lele37g0617 271 FunFam 60S ribosomal protein L7 112 216 - -
Lele37g0617 271 SUPERFAMILY Ribosomal protein L30p/L7e 112 271 IPR036919 -
Lele37g0617 271 Gene3D - 112 212 IPR036919 -
Lele37g0617 271 Gene3D - 213 271 IPR036919 -
Lele37g0617 271 CDD Ribosomal_L7_archeal_euk 112 271 IPR035808 -
Lele37g0617 271 Pfam Ribosomal L30 N-terminal domain 37 108 IPR012988 -
Lele37g0617 271 ProSitePatterns Ribosomal protein L30 signature. 131 163 IPR018038 -
Lele37g0617 271 PANTHER 60S RIBOSOMAL PROTEIN L7 35 271 IPR039699 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0617 Lele-ChrLele37 5121551 5124557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0617 32 271 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 84.167 1.13e-152 424