Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0607 ATGGCTCAAGACCCTGCATCTGATCTTCTCTCAGCTCTGTTTACCGAAAATGAAGAAGATGATCACGCCCCATTTACGGATGATGAATATGCTCAACGCTTGCAGTTTCAGGAAACCCTTTACTCCTCTTTTGTCTCTTCCAAAAGGGCAAAAAATGATCTATCATCTTCTTCTTCTTCTTCTTTACTGATTTTAGCTTCATCTTCATCGTCCTCTGCTCCTTTAAAAATTGCTGACACTTGCCCTGCCCCAAAAACAGAGGACATGGAACACTCAAATGAAACGTGTGAATCTTGTCTAGTCATCTGCGAAATCTGTGCAGAAACTATAGATGCTTCCCAGATGTTCAGAAATCAGAGATGCAACCACTCGTTTTGTTCTGATTGTGTAACAAAACAAGTGGCAACACAAATTCAGGATAGCATAACAGAAGTTCCTTGTCCTGGTTTGGACTGTAAAAGTATTCTTGAGCTTGATGCTTGTAGGCCATGGCTTCCCAAGGATTTGCTTGATAGGTGGGATCAAGCTCTGTGTGAAGCTCTGTTTCTGGCAGCCCCTAAATTTTACTGCCCCTTTAAGGATTGTTCAGCTATGTTGCTAGCTGAGAATGAAGAAGAAGGAGAAGATCATCAAGCTATAAGGGAAGCAGAGTGCCCCGTTTGCCACAGACTGTTCTGTGCAAATTGTTATGTGCCATGGCATCCTGGTGCTGAATGTGAGGAATTTCAGACACTGAATGAGAATGAGAGAGAGAGGCAAGATCTGATTGTGACAGAGCTTGTTAAAGAGAAGAAATGGAGAAGGTGTCCCAATTGTAGGTTCTTTGTGGAGAAGACAGAAGGATGCTTGCACATCACTTGCAGGTGCCGGTTTGAGTTTTGCTATGGGTGTGGAGAAAAATGGACTTCTAATCATGGAGGCTGCCAAACAAATTAA 936 0.4284 MAQDPASDLLSALFTENEEDDHAPFTDDEYAQRLQFQETLYSSFVSSKRAKNDLSSSSSSSLLILASSSSSSAPLKIADTCPAPKTEDMEHSNETCESCLVICEICAETIDASQMFRNQRCNHSFCSDCVTKQVATQIQDSITEVPCPGLDCKSILELDACRPWLPKDLLDRWDQALCEALFLAAPKFYCPFKDCSAMLLAENEEEGEDHQAIREAECPVCHRLFCANCYVPWHPGAECEEFQTLNENERERQDLIVTELVKEKKWRRCPNCRFFVEKTEGCLHITCRCRFEFCYGCGEKWTSNHGGCQTN 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0607 311 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 90 181 IPR013083 -
Lele37g0607 311 MobiDBLite consensus disorder prediction 1 28 - -
Lele37g0607 311 SUPERFAMILY RING/U-box 100 180 - -
Lele37g0607 311 Gene3D - 236 311 - -
Lele37g0607 311 SUPERFAMILY RING/U-box 250 309 - -
Lele37g0607 311 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 53 301 IPR031127 GO:0004842|GO:0016567
Lele37g0607 311 Pfam IBR domain, a half RING-finger domain 187 239 IPR002867 -
Lele37g0607 311 Pfam IBR domain, a half RING-finger domain 258 308 IPR002867 -
Lele37g0607 311 SMART ibrneu5 171 239 IPR002867 -
Lele37g0607 311 SMART ibrneu5 249 308 IPR002867 -
Lele37g0607 311 ProSiteProfiles Zinc finger RING-type profile. 103 148 IPR001841 -
Lele37g0607 311 Pfam Zinc finger, C3HC4 type (RING finger) 103 148 IPR018957 GO:0046872
Lele37g0607 311 SUPERFAMILY RING/U-box 176 243 - -
Lele37g0607 311 ProSiteProfiles TRIAD supradomain profile. 99 311 IPR044066 -
Lele37g0607 311 FunFam RBR-type E3 ubiquitin transferase 98 184 - -
Lele37g0607 311 FunFam RBR-type E3 ubiquitin transferase 241 311 - -
Lele37g0607 311 ProSitePatterns Zinc finger RING-type signature. 121 130 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0607 Lele-ChrLele37 5009589 5011243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0607 103 298 C3H Transcription Factor Family AT2G19610 29.612 4.58e-22 94.0