Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0606 ATGGCTTTCTGGGGAGTGGAAGTCAAACCCGGAAAATCTTTCACTCATAAATTTGATGACTTGAAAGGAAGACTACATATTTCAATGGCCACTTTGGGGGTTGGTTCTGCCCCAGCCAAAAGCAGACTTCAGTGTAATGTAGGCAACAATAGCCCTGTTTATCTATGTTCTCTGTCTTCTGGAACCAATGAGTCATTGCAACTTAATTTGGAATTTGAGGAGGCTGATGATGTCATCTTTTCAGTGATTGGTCCTCGGAGCATTCACTTGTGTGGTTACCATCTTGGTAGTGGCCGAAGAGCCAACACGATTGTGGAGTCAGAATCCTATGGAGAAGATATTGCGAACACTGAGACAGACAGATCTGATTGCAGTAATGAAGATGAGTATGAGGGTAGTTTTATTGATGATGATGCCAATCCAGAGGTCTTCCCAGAATCACCAATTTTAAGTGAAGAGGAAGCTTCACCTGCTAACAAACGTAAAGGTAGTCGCCGCCGACTGCAGAAGAAGCACCAAAGAGTAGACTCGGATGATGACAGTTTGCCAATTTCATCTATTGACAAGAGTAAAGCTTCTGCAAAGGTCTTGCTTGAGGAAATGGATGTTAATGATGACAGGAGAGGAAGTGATGCCAGCCCCAAGAATGGTGAAGATGATGGCAACAATGCTATTAAATCAAATTCCAATTCAAAAGCTGGCGCTGTTCTTCTAGATACTAAGACACATAGGGATGTTGCATTGCCTGCCACTGTAGTAGGTCCTGTAAAAAGTCGAGGAAAGAAGAGGAAAAAAGAAGAACAGGCTCCCAAAGATTCACATTCTGAAGATGACAACGCTTACTGTAAAGAGTCCAAAGCCCAAAGAGACAAGGCAGATACTGATATTGCGATCCCCAAATTTTCTGAACGACAGAATCCAGATTTGCAGCAACACAATAAAGAGAGAGGGGACAATGGCACTCATGAGCTTCCTGATGCGAATCAATCTGGTGATAGAAAAATGAAAAAGAGGAGGAAGAAAGACAAGAGTCAGGGTGATCTAGAAGTTAATACTTCCGATATGCCTCAATCATCTGTTAATGGAAATATTAGGACTGTGACAAAGGATGAATGGGTAACGGCTGATGCGAAGCCTTCTGAAGTTAAAACATTGCCAAACGGTTTAGTTATTCAAGAGCTAGAAAAGGGGATAGAAGATGGAAAAATTGCTGCATCAGGAAAAAAGATTAGTGTCCTTTTCACTGGCAAGCTGAAGGATAATGATGAAGTCTTTGAGTCAAATATTGGCCATGCACCTTACAAGTTTCGGCTTGGTAAAGGACAAGTTTTAGAGGGCTGGGATGTTGGCCTTGAAGGCCTGCGAATGGGAGGAAAGAGAAGACTCATGATCCCACCATCCAAGGGGTTTGGTAGTGAAGGACACAACACGAAAGTACCACCGAACTCGTGGCTGGTTTATGACTTCGAATTGGTTAAAGTCCATTGA 1488 0.4274 MAFWGVEVKPGKSFTHKFDDLKGRLHISMATLGVGSAPAKSRLQCNVGNNSPVYLCSLSSGTNESLQLNLEFEEADDVIFSVIGPRSIHLCGYHLGSGRRANTIVESESYGEDIANTETDRSDCSNEDEYEGSFIDDDANPEVFPESPILSEEEASPANKRKGSRRRLQKKHQRVDSDDDSLPISSIDKSKASAKVLLEEMDVNDDRRGSDASPKNGEDDGNNAIKSNSNSKAGAVLLDTKTHRDVALPATVVGPVKSRGKKRKKEEQAPKDSHSEDDNAYCKESKAQRDKADTDIAIPKFSERQNPDLQQHNKERGDNGTHELPDANQSGDRKMKKRRKKDKSQGDLEVNTSDMPQSSVNGNIRTVTKDEWVTADAKPSEVKTLPNGLVIQELEKGIEDGKIAASGKKISVLFTGKLKDNDEVFESNIGHAPYKFRLGKGQVLEGWDVGLEGLRMGGKRRLMIPPSKGFGSEGHNTKVPPNSWLVYDFELVKVH 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0606 495 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 403 492 IPR001179 GO:0003755
Lele37g0606 495 MobiDBLite consensus disorder prediction 260 298 - -
Lele37g0606 495 MobiDBLite consensus disorder prediction 110 363 - -
Lele37g0606 495 MobiDBLite consensus disorder prediction 193 215 - -
Lele37g0606 495 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 42 494 - -
Lele37g0606 495 MobiDBLite consensus disorder prediction 307 333 - -
Lele37g0606 495 MobiDBLite consensus disorder prediction 171 185 - -
Lele37g0606 495 Gene3D Nucleoplasmin core domain 1 98 - -
Lele37g0606 495 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 407 495 IPR001179 GO:0003755
Lele37g0606 495 MobiDBLite consensus disorder prediction 349 363 - -
Lele37g0606 495 MobiDBLite consensus disorder prediction 216 236 - -
Lele37g0606 495 SUPERFAMILY FKBP-like 367 494 - -
Lele37g0606 495 Gene3D - 359 495 IPR046357 GO:0003755
Lele37g0606 495 MobiDBLite consensus disorder prediction 114 128 - -
Lele37g0606 495 Pfam Nucleoplasmin-like domain 3 94 IPR041232 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0606 Lele-ChrLele37 4992342 4997543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0606 406 492 Calmodulin-binding Proteins AT5G48570 35.632 4.92e-13 69.3