Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0596 ATGTGTCTTTCTCAGATGGGTTCTGCAGAGGATAAAATAGACCTTGACTCAGATGAGGAGATTGCTTTTAGACCGTCACCATCTGCTAGAAAAGTCCATACATTTGATTTTGAGACAGAACATGTACTTTCTCCTGTAAATTTGGCCAGCTCGTCCTTCTTTAAGCGGACACAGATCCGACCTTTCAGGAGCATATATATTGTCTTAATTAAAGCGAAGATCAACATGTTGCTACCTTTTGGTCCCTTGGCAATATTGCTACATTATCTAACACAAAAGCATGGATGGGTGTTCTTTTTCAGCTTATTGGGTATTACTCCTTTGGCAGAACGTTTGGGATATGCTACCGAGCAGCTTGCATTGTATACTGGACCAACAGTTGGAGGTCTGCTGAATGCCACATTTGGCAATGCCACTGAAATGATTATATCAATTTATGCTTTGAAAAATGGGATGATAAGAGTTGTTCAGCAGTCTCTATTGGGCTCAATTTTATCAAATATGCTTCTGGTTCTTGGATGTGCCTTCTTTACTGGAGGGATTGTCCACCACAATAAGATTCAGCTTTTCAACAAGGCATCTGCTGTTGTAAATTCAGGGTTGCTCCTGATGGCTGTGATGGGAATACTGTTTCCTGCTGTGCTTCACTTTACTCACTCTGAGGTTCATTTTGGAAAATCAGAGTTATCACTATCCAGATTTAGTAGCTGTATAATGCTCGTGGCATATGCAAGCTACCTTTTCTTTCAATTAAGAAGTCAGCATAATCTTTATAGCCCTATTGAATCGGAGGACGGTAATAGTGAAAATGATGATGAAGAAGAAGTTGAATTAACTCAATGGGAAGCAATAGGCTGGCTTACTATTTTGACAATATGGGTATCTGTATTGTCTGGATACCTAGTGGATGCCATACAGGGGGCATCTGAGTCATTGCATATGCCTGTGGCTTTTATAAGTGTCATATTGCTTCCAATAGTAGGCAATGCTGCTGAACATGCAAGTGCCATCATGTTTGCCATGAAGGATAAGCTCGATATCACACTTGGAGTTGCTATTGGGTCTTCTACACAGATATCTATGTTTGTGATCCCTTTCTGTGTTGTTATTGGGTGGTGCATGGGAAAAGAAATGGACTTGAATTTTCAACTCTTTGAGACCGCCACACTTTTTATCACAGTTCTAGTAGTTGCATTTATGTTGCAGGAAGGGACCTCAAATTATTTTAAAGGCTTGATGCTTATTCTTTGCTACCTCATTGTTGCAGCCAGTTTTTTTGTACATGTAGACCCTACAGAAGGTGATAACTGA 1311 0.4012 MCLSQMGSAEDKIDLDSDEEIAFRPSPSARKVHTFDFETEHVLSPVNLASSSFFKRTQIRPFRSIYIVLIKAKINMLLPFGPLAILLHYLTQKHGWVFFFSLLGITPLAERLGYATEQLALYTGPTVGGLLNATFGNATEMIISIYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHHNKIQLFNKASAVVNSGLLLMAVMGILFPAVLHFTHSEVHFGKSELSLSRFSSCIMLVAYASYLFFQLRSQHNLYSPIESEDGNSENDDEEEVELTQWEAIGWLTILTIWVSVLSGYLVDAIQGASESLHMPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVIGWCMGKEMDLNFQLFETATLFITVLVVAFMLQEGTSNYFKGLMLILCYLIVAASFFVHVDPTEGDN 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0596 436 Pfam Sodium/calcium exchanger protein 96 251 IPR004837 GO:0016020|GO:0055085
Lele37g0596 436 Pfam Sodium/calcium exchanger protein 285 423 IPR004837 GO:0016020|GO:0055085
Lele37g0596 436 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 39 431 IPR004713 GO:0006812|GO:0008324|GO:0016020
Lele37g0596 436 FunFam Vacuolar cation/proton exchanger 271 427 - -
Lele37g0596 436 FunFam Vacuolar cation/proton exchanger 125 264 - -
Lele37g0596 436 TIGRFAM caca2: calcium/proton exchanger 68 426 - -
Lele37g0596 436 Gene3D - 125 269 IPR044880 -
Lele37g0596 436 Gene3D - 271 427 IPR044880 -
Lele37g0596 436 TIGRFAM cax: calcium/proton exchanger 77 426 IPR004798 GO:0006816|GO:0015369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0596 Lele-ChrLele37 4897415 4907022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0596 50 435 Antiporters AT1G55730 74.490 0.0 588