Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0594 ATGGAGTCGTCGTCGTCGTCGTCATCAATGTCCACTGTGTTAGTGGTCCTCTTCTTCTTTTCAATTTCGACATCTCTGTGTTTTCATGGCGGCGAGGCAACGGTGGTTATTGTGTCTAAGGATGGGGATGGAGATTATGGAAGTGTGAGTGAAGCCATAGCCAAAGCTCCTAAGTTCAGTGAAAAACCCTACACCATTCAAGTTCGAAGTGGAACTTATAAAGAATATGTCGTGGTTCCGCCGGAGAAAACCAATATTAAGCTCGTCGGTGATGGCCCTCGCCTGACCAGAATAGTTGGCTCCCACTATGGTACCACCCTAGATGTTTATGGAGATGGGTTCGTGGCGGAGAACATCGGGCTGGTGAACTCAGCTGGGTTAAAAGCAAGCGCTGCTGTGGCGGTTCGCAATCAAGCCAACAAGAGCATCTTCTTCCAATGTTCTATTGAAGGCTTTCAAGATACACTCTGGGCGGTCGCCGGCCGCCAGTTCTACAAGAATTGTGACATCTATGGCACTGTTGACTTCATCTACGGTAATGCTGTTTCTGTCTTCCAGGATTGCAACCTCTACGCTCGTTACCGGCCCTACGTCACCTTCACCGCTCAGTCCCGTGATAGCCCTAACGAGCATACCGCCTTCGCCTTCCAACACTGCCACTTCACGATGGCCCCAGAAGATGCCGGCATGAAGTCGAAGGTTCGTGCGACGTTGGGAAGGCCATGGCGGCCGTATTCGACGGTGGCCGTGATTGACTCGTTCATTGACTCCATGGTTGACCCCATGGGATGGGAAGAAATGAGAGGTCAGCCTACCGATAAGGTGACGTATGTGGAGTTCAATAATTATGGGCCTGGGTCCAACACTTCTAGGAGAGTCCACTGGCCTGGTGTTAGACTCCTTAACGGCCCAAATGAGGCCCAACGTTTTACAGCTTCTGTTCTGTTAGATGCTGATTCTTGGATCCCCCACAAGGGGGTTCCTTATAATTGA 993 0.5065 MESSSSSSSMSTVLVVLFFFSISTSLCFHGGEATVVIVSKDGDGDYGSVSEAIAKAPKFSEKPYTIQVRSGTYKEYVVVPPEKTNIKLVGDGPRLTRIVGSHYGTTLDVYGDGFVAENIGLVNSAGLKASAAVAVRNQANKSIFFQCSIEGFQDTLWAVAGRQFYKNCDIYGTVDFIYGNAVSVFQDCNLYARYRPYVTFTAQSRDSPNEHTAFAFQHCHFTMAPEDAGMKSKVRATLGRPWRPYSTVAVIDSFIDSMVDPMGWEEMRGQPTDKVTYVEFNNYGPGSNTSRRVHWPGVRLLNGPNEAQRFTASVLLDADSWIPHKGVPYN 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0594 330 FunFam Pectinesterase 4 32 330 - -
Lele37g0594 330 Gene3D - 32 330 IPR012334 -
Lele37g0594 330 ProSiteProfiles Phosphotyrosine interaction domain (PID) profile. 198 239 IPR006020 -
Lele37g0594 330 SUPERFAMILY Pectin lyase-like 33 329 IPR011050 -
Lele37g0594 330 Pfam Pectinesterase 36 318 IPR000070 GO:0030599|GO:0042545
Lele37g0594 330 PANTHER PECTINESTERASE 35 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0594 Lele-ChrLele37 4878787 4881845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0594 26 329 Carbohydrate Esterase AT5G49180 38.558 1.64e-78 248