Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0593 ATGGCCCAAGATTCTGCCTTTGATCTTCTCTACGAATTGTTTTTCTTTTCTTCTTTCTTCTTCTCTCTCGTGGCCACTGAACTTCTCTGCATTGAATTTCCATTTTTCTCAGCTCTGTTTTTCCAACATGAAGATGATCATCATGTCCCATTCACTCTTGCTCAATATCCTCAACGCTCGCGGTTTCCCAAGACAAAAGATTCTCCTTCCCTCCATTTACCACCATCATCACCTTCTTCTTCTTCTTGGAGTAACCCAGATACGAAGCATGTGAAGTCTTCAATGAAAACAGAGGAACCCTTGCAGATTATCTGTGAAATATGTGCAGAAACTAAAAGAACTACCCAGATGATCAAGAACCATACATGCGACCATTCATATTGCTATGATTGTGTAACAAAACATGTAGCCACGAAAATTCAAGACACCATAACAGCAGTTCCATGTCCTGGTTTGGATTGTAAAACTGTTTATGATCTCGAAGCTTGTCGGCCATGGCTTCCAAAGGACTTACTTGAAAGGTGGGATCAGGCTCTGTGTGAAGCTCTGTTTCTGCAAGTTCCTAAATTTTACTGTCCCTTTAAGGATTGTTCAGCGATGATGTTGGTTGAGAATGAGGAAGATCAACGAGGTGCGGGGGAAACAGAGTGCCCTGTTTGCCATAGGATGTTCTGTCCAAGGTGTAATGTTCCATGGCATCCTGGAATTGACTGTGGGGAATATCAGAAATTGAATGAGAATGAGAGACAGAGAGAAGATCTTCTTGTGAGGAAGCTCGCTAAAGAAAAGAAATGGGGAAGGTGCCCAAAGTGTAAGTTTTATGTGGAGAAGATACATGGATGCTTGCATATCACTTGCAGGTGCAAATATGAGTTTTGTTATGCATGTGGAGAAGAATGGAGTTCTAACCATGGAGGCTGCCAAAGAAATTAG 933 0.4191 MAQDSAFDLLYELFFFSSFFFSLVATELLCIEFPFFSALFFQHEDDHHVPFTLAQYPQRSRFPKTKDSPSLHLPPSSPSSSSWSNPDTKHVKSSMKTEEPLQIICEICAETKRTTQMIKNHTCDHSYCYDCVTKHVATKIQDTITAVPCPGLDCKTVYDLEACRPWLPKDLLERWDQALCEALFLQVPKFYCPFKDCSAMMLVENEEDQRGAGETECPVCHRMFCPRCNVPWHPGIDCGEYQKLNENERQREDLLVRKLAKEKKWGRCPKCKFYVEKIHGCLHITCRCKYEFCYACGEEWSSNHGGCQRN 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0593 310 ProSiteProfiles Zinc finger RING-type profile. 105 150 IPR001841 -
Lele37g0593 310 SUPERFAMILY RING/U-box 249 308 - -
Lele37g0593 310 SUPERFAMILY RING/U-box 178 243 - -
Lele37g0593 310 Gene3D - 234 310 - -
Lele37g0593 310 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 62 307 IPR031127 GO:0004842|GO:0016567
Lele37g0593 310 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 101 183 IPR013083 -
Lele37g0593 310 SMART ibrneu5 173 238 IPR002867 -
Lele37g0593 310 SMART ibrneu5 248 307 IPR002867 -
Lele37g0593 310 ProSiteProfiles TRIAD supradomain profile. 101 310 IPR044066 -
Lele37g0593 310 MobiDBLite consensus disorder prediction 60 90 - -
Lele37g0593 310 MobiDBLite consensus disorder prediction 60 95 - -
Lele37g0593 310 SUPERFAMILY RING/U-box 103 182 - -
Lele37g0593 310 Pfam IBR domain, a half RING-finger domain 256 307 IPR002867 -
Lele37g0593 310 Pfam IBR domain, a half RING-finger domain 188 238 IPR002867 -
Lele37g0593 310 Pfam Zinc finger, C3HC4 type (RING finger) 105 150 IPR018957 GO:0046872
Lele37g0593 310 ProSitePatterns Zinc finger RING-type signature. 123 132 IPR017907 -
Lele37g0593 310 FunFam RBR-type E3 ubiquitin transferase 101 186 - -
Lele37g0593 310 FunFam RBR-type E3 ubiquitin transferase 240 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0593 Lele-ChrLele37 4875157 4876408 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0593 105 297 C3H Transcription Factor Family AT2G19610 29.851 1.46e-17 80.9