Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0591 ATGGCTCAAGACCCTGCATCTGATCTTCCCTCAGCTGTGTTTCCCGAAAATGAAGAAGACGATCAACGCTTGCAGTTTCAGGAGACCCTTTACCCCTCTTTTGTCGCTTCCAAAAGGGAAAAAAATGATCCATCACCATTATCTTCTTCTTCTTCTTCTTCTTTACTGATTTTAACTTCAGCTTCATCATCCTCTGCTCCTTTAAAAATTGCTGACACTTGCCCTGCCCCAAAAACAGAGGACATGGAACACTCAGATGAAACGTGTGAATCTTGTCTAGTCGTCTGCGAAATCTGTGTAGAAACTATAGACGCTTCCCAGATGTTCAGAAATCAGAGATGCAACCACTCCTTTTGTTCTGATTGTGTAACAAAACAAGTGGCAACACAAATTCAGGATAGCATAACAAAAGTTCCTTGTCCTGGTTTGGACTGTAAAAGTATTCTTGAGCTTGATGCTTGTAGGCCATGGCTTCCCAAGGATTTGGTTGATAGGTGGGATCAAGCTCTGTGTGAAGCTCTGTTTCTGGCAGCCCCTAAATTTTACTGCCCCTTTAAGGATTGTTCAGCTATGTTGCTGGCCGATGATGAAGAAGAAGGAAAAGATCATCTAGCTATAAGGGAAGCAGAGTGCCCCGTTTGCCACAGACTGTTCTGTGCAAATTGTTATGTGCCATGGCATCCTGGTGTTGAATGTGAGGAATTTCAGATACTGAATGAGAATGAGGGAGAGAGGCAAGATCTGATTGTGACAGAGCTTGCTAAAGAGATGAAATGGAGAAGGTGTCCCAATTGTAGGTTCTTTGTGGAGAAGACAGAAGGATGCTTGCACATCACTTGCAGGAATATGCTTGGCATGAATTTTGCAGGTGCCAGTTTGAGTTTTGCTATGGGTGTGGAGGAAAATGGACTTCTACTCATGGAGGCTGCCAAACAAATTAAGATTATGTAA 951 0.4311 MAQDPASDLPSAVFPENEEDDQRLQFQETLYPSFVASKREKNDPSPLSSSSSSSLLILTSASSSSAPLKIADTCPAPKTEDMEHSDETCESCLVVCEICVETIDASQMFRNQRCNHSFCSDCVTKQVATQIQDSITKVPCPGLDCKSILELDACRPWLPKDLVDRWDQALCEALFLAAPKFYCPFKDCSAMLLADDEEEGKDHLAIREAECPVCHRLFCANCYVPWHPGVECEEFQILNENEGERQDLIVTELAKEMKWRRCPNCRFFVEKTEGCLHITCRNMLGMNFAGASLSFAMGVEENGLLLMEAAKQIKIM 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0591 316 ProSitePatterns Zinc finger RING-type signature. 114 123 IPR017907 -
Lele37g0591 316 Gene3D - 229 283 - -
Lele37g0591 316 SMART ibrneu5 164 232 IPR002867 -
Lele37g0591 316 SUPERFAMILY RING/U-box 246 280 - -
Lele37g0591 316 Pfam IBR domain, a half RING-finger domain 180 232 IPR002867 -
Lele37g0591 316 FunFam RBR-type E3 ubiquitin transferase 84 177 - -
Lele37g0591 316 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 48 284 IPR031127 GO:0004842|GO:0016567
Lele37g0591 316 SUPERFAMILY RING/U-box 93 173 - -
Lele37g0591 316 ProSiteProfiles TRIAD supradomain profile. 92 316 IPR044066 -
Lele37g0591 316 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 89 174 IPR013083 -
Lele37g0591 316 Pfam Zinc finger, C3HC4 type (RING finger) 96 141 IPR018957 GO:0046872
Lele37g0591 316 ProSiteProfiles Zinc finger RING-type profile. 96 141 IPR001841 -
Lele37g0591 316 SUPERFAMILY RING/U-box 169 236 - -
Lele37g0591 316 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0591 Lele-ChrLele37 4863984 4865544 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0591 96 282 C3H Transcription Factor Family AT2G19610 28.796 2.43e-16 77.4