Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0572 ATGGCCGCTCCCTCATTCCAAGTGGTGAAGCCGTCGTCGTCGTTGGCCCTCATCTTCTTCGTCGTTGCTTCCCTCTCCGCCGTCTCCGCCACCGACCACATCGTTGGTGCCAACCGTGGCTGGAACCCCGGCATTAACTACACTCTCTGGGCCAACAACCAGACTTTCTATGTTGGCGACCTCATCTCATTCAGGTACGTGAAAAACCAGTACAATGTGTTTGAGGTGAACCAAACTGGGTATGACAACTGCACTACAGAGGGGGCTATTGGGAATTGGACAAAAGGCAAAGATTTCATACCACTGAATGAGGCTAAGAGGTATTACTTCATTGGTGGCAATGGCCAATGCTTCAATGGCATGAAAGTCTCTATTCTTGTTCATCCTCTTCCTCCTCCTCCTTCTTCTGCTGTTGCTGCTAAGCATGAAAACCCATCCTCTGCTGCTGCTGCTCCAATGCTTTTCTCTGGGGGATTCTTGTTTTCTATGCTCATGTCTTCTTCTGCTTTGGTTTGGTTTGGATGTGGTTGGATCTAG 537 0.4935 MAAPSFQVVKPSSSLALIFFVVASLSAVSATDHIVGANRGWNPGINYTLWANNQTFYVGDLISFRYVKNQYNVFEVNQTGYDNCTTEGAIGNWTKGKDFIPLNEAKRYYFIGGNGQCFNGMKVSILVHPLPPPPSSAVAAKHENPSSAAAAPMLFSGGFLFSMLMSSSALVWFGCGWI 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0572 178 ProSiteProfiles Phytocyanin domain profile. 31 129 IPR003245 GO:0009055
Lele37g0572 178 PANTHER BLUE COPPER PROTEIN 28 140 IPR039391 GO:0009055
Lele37g0572 178 CDD Phytocyanin_like_1 31 127 - -
Lele37g0572 178 FunFam Lamin-like protein 29 130 - -
Lele37g0572 178 Gene3D - 29 130 IPR008972 -
Lele37g0572 178 SUPERFAMILY Cupredoxins 30 128 IPR008972 -
Lele37g0572 178 Pfam Plastocyanin-like domain 41 121 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0572 Lele-ChrLele37 4723570 4724716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0572 13 137 Phytocyanin Superfamily AT5G15350 44.882 8.74e-41 134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0572 37 4723570 4724716 Lele39g0858 39 17522135 17523250 hybridization
Lele37g0572 37 4723570 4724716 Lele40g0510 40 4312432 4313578 hybridization