Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0570 ATGCTTCATCATGAACCTCGTATAAGAATTTCACTTGAAATATCATCTGGGTATTATATATATAAAGAAGTCAGAATGGACAACAAGATGGGGATGATGATGATGAGCTTCAACAGATTCAAGACAGGCTGTGCTTTATCTGCCATAGCTTTCTCTCTACTGCTCATAGTTACATTGATGTATCAGAACTCGGTGTTTTATCTTTCTGTTGAGGGTTTTTCAAAAGACAAGGTACTAGGAAGAAGAAGACCTCTCAACGTTACAACCATCGATTTAGGATTCAGAGAAAGAGCAAATAACACATCAGATATCAATGGAACCTCCTCAGAGTCAAGATTTTCCCAGCAAACACTCAATATTACAGCAACAGAAGATACTGCTCAGAATCTTACAGAGTCACATGAAGAATTGAAAAAAGCTTCAAACTCAACTGTCAAAAATGACACTGATCAGCAATTATTTGAAGGGCTTCTAGCTTCTGGGTTTGATGAATCATCATGCATAAGCAGGTTTCAATCTTACTTGTATCGATACAGAAAATCTTCTCCTCACAAACCCTCTTCATATCTGATCTCCAAGCTCCGCAATTATGAAGAAATTCACACAACCTGTGGACCTGGAACAAGACATTACAATAAAGCCATGAAAAAGCTCGTAAAGTTTAAGAAACACAGTACTGATACCACTTGTAAGTACCTTGTTTGGACTCCTGCAAATGGCTTAGGGAACAGAATCATAAGCATGGCTGCTGCATTTGTTTATGCTATCCTCACAGATAGAGTCCTACTTGTGAAATTTGAAGATGACATGATGGGTTTGTTCTGTGAACCATTTCTAAATTCAACATGGGAATTTCCAAAAGATTCTCCATTTTGGAATCTTCCAAGAGATGTTGAAACATATCAAAACATGATAGCTAAGAACAGTTCTTCATCGCGGCCGCCATCGGTTCTTCATCTGAATCTGCAGCATACCAAAGATGATCCTGAGAAGTTTTTCCATTGTGATCAAAGTCAAAAGCTTGTTCAAAAAGTTCCTATCTTGATTCTACAAACAGATCAGTATTTTGTACCTCTTCTGTTCATGATCCCATCTTTCAACCCTGAGATCACACAAATGTTCCCAGAAAAAGACACTGTTTTTCACCACGTGGGACATTACCTTTTTCACCCTTCAAATGAAGCATGGGGAATAATAAAAAGATTCTATGATGCTTACTTAGCAAAATCAGATGTGAAAATTGGCCTTCAAATCAGATTATTCTCTCCTGATTCAACCCCACATGAAGCAGCCATGGACCTACTCTTGAGATGTACCTTGCAGCACAAGTTACTCCCAGAACTAGACACGAAAAACCTGGTAGCTTCTTCAACCCGGGAAAACTCGAGCTTAAAGGCGGTTCTAGTGGCATCTCTATTTCAAGAATATAGTGAGAATTTGAGGATTATGTATCTGACAAAACCAACCATTACAGGGGAATTGGTTGGAGTATATCAAGCAAGTCATGAAGGGAAACAAAAGTTTCATAACAATATGCATAATATGAAGGCATGGACTGACATGTACCTTTTGAGTTTGAGTGATGTGTTGGTGACTACTTCTTTATCTACTTTTGGGTATGTGGCTCAAGGTTTGGGAGGATTAAAGCCATGGCTTCTTTATAGGTTAGTTGGAAATAAGTCTCGTCATCCTAATCCACCTTGTCAAAGGGACTTCTCTATGGAGCCTTGTTATCACATTCCTCCTAAACATGATTGTGTGGGAAACACTATCAAAGGTCTTAGTTCTTCTTTCCCTTACATGAGGTCATGTTTGGATTATTCTTCTGGAGTGAAGTTGTTTAATGTTTCTGTGTAG 1857 0.3845 MLHHEPRIRISLEISSGYYIYKEVRMDNKMGMMMMSFNRFKTGCALSAIAFSLLLIVTLMYQNSVFYLSVEGFSKDKVLGRRRPLNVTTIDLGFRERANNTSDINGTSSESRFSQQTLNITATEDTAQNLTESHEELKKASNSTVKNDTDQQLFEGLLASGFDESSCISRFQSYLYRYRKSSPHKPSSYLISKLRNYEEIHTTCGPGTRHYNKAMKKLVKFKKHSTDTTCKYLVWTPANGLGNRIISMAAAFVYAILTDRVLLVKFEDDMMGLFCEPFLNSTWEFPKDSPFWNLPRDVETYQNMIAKNSSSSRPPSVLHLNLQHTKDDPEKFFHCDQSQKLVQKVPILILQTDQYFVPLLFMIPSFNPEITQMFPEKDTVFHHVGHYLFHPSNEAWGIIKRFYDAYLAKSDVKIGLQIRLFSPDSTPHEAAMDLLLRCTLQHKLLPELDTKNLVASSTRENSSLKAVLVASLFQEYSENLRIMYLTKPTITGELVGVYQASHEGKQKFHNNMHNMKAWTDMYLLSLSDVLVTTSLSTFGYVAQGLGGLKPWLLYRLVGNKSRHPNPPCQRDFSMEPCYHIPPKHDCVGNTIKGLSSSFPYMRSCLDYSSGVKLFNVSV 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0570 618 FunFam Galactoside 2-alpha-L-fucosyltransferase 228 279 - -
Lele37g0570 618 Pfam Xyloglucan fucosyltransferase 146 586 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lele37g0570 618 Gene3D - 227 331 - -
Lele37g0570 618 PANTHER FUCOSYLTRANSFERASE 2-RELATED 49 615 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lele37g0570 618 Coils Coil 120 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0570 Lele-ChrLele37 4713039 4716371 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0570 145 613 Xyloglucan Fucosyltransferase1 AT2G03220 51.261 2.23e-161 472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0728 41 17222849 17224928 Lele37g0570 37 4713039 4716371 CCT
Lele42g0725 42 20300915 20304960 Lele37g0570 37 4713039 4716371 CCT
Lele37g0570 37 4713039 4716371 Lele39g0860 39 17530610 17533574 hybridization