Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0556 ATGGCTCCTCCTGACAGAGAAGTGCTTCAGTCACTTGTAGATGTTGGAGATGGCCTTCTCAATCACCCCTCTTCCATTGATGAGCTTCTCGCTCTTCTTGACCTGCTTCAGGAACTTGAGAATGTATTATCAACTTTGGATCAAGAACCAGATGAAACTGTGAAAGAAGCAATTCTGCCATCAATGAAAGCATTAATTTCCAGTGAACTTTTGAGGCACTCAGATGAGGATGTAAAGATTTCCGTTACATCTTGCATTGCTGAGATTACCAGAATAACAGCACCGGATGCCCCTTATGGTGATGAACATATGAAGGAAATTTTCAAGCTCACAGTTGAAGCTTTTGAAAAATTATCCGATGTACCGAGCCGCAGTTATGACAAGGCACTTTTAATAGTTGATAATGTTGCAAGGGTCAGATCATGCCTGCTGATGATGGATCTTGAGTGTGATGACTTGATCGTTCAAATGTTTCAGATTTTCCTAAGAGTTATTAGTTCAATGCCAAACCACCCTGAGGTTGTGACCTATGCGATTGAAGCAATAATGACAATGGTCTTGAATGAGAGTGAAGAAATTTCCGCTGATCTTCTAAGACCAATATTAGATAGCCTGAGAAAGGAAAACCAGACAACTTCACCTATCTCTTGGTCATTGGCGGAGAAAGTTGTTACCAACTGTGCTGATAAGCTTCAGTCCTATGTTATGAGAGCGGTGCAGTCCATGGGCAGACCTCTGGATGCTTTTGCTGAAATAGTAGTTTCAATTTGCCAGAGAGGATCTGAAACTCTTCAACGCAATCATTCAAATGGTTTTGGAAATCCATTGGTTCAAGCAGGTGAAAACGAACTTTCCGTGGGCAAAAGTGCAGATGAGCAATACTGTGATGACCAAGAACCTGATATGACTTGTGCAAGACATGTTGCTCAAAGTATGGATGACGCCAAGCTGAACAAAAGAAATCCCAGTTCTACTGTGCACAGTGAAATCATCAAGAAGAAAAGTGAAAAGAAACAACCTCATTCTGATCTTACTAAGAATGAGAAAAGAAAGAATACAAAAACCAATTTAGAAAATGGAAATTCAAAGTCACTTGAAAAATCAAGTTCAGAAGCTGAGCTCGATGTCGTGCCAAAGAAAAGGGGTCATAAACCCAATTCTTTAATGAATCCAGAAGAAGGGTATGATCACTCTCAGATTTGCATGGACAGAAAATCTGAAAATGTGGGCGAAGTTTCTCAACCTAAAACAGGTAAAACCATACAACACAAAAAGGCTTATGATAGAGATACTGGTCTTCCACCTTCTAAAAACTCTGCATCCCAAAAGGATAAGTTTCTTTTAGAGCCTGAAAATGCTGTTGAACTTTCTCAACATAAAACCAATAAGAAATCCAGAAAATCATCTCAAGTCAGAAAGGCTTGTGATAGTGGTATAGAGCTTTCGCCTCCTGTAAGCCATGATTTGCTAAAGGTTGCTAGTCTGAAGAAATCTGAAAATAAAGGCTGTGAAGCTTCAGTGTCCCAACGTGAAACTGATAAGAATATCAATGCTGCTCACACTTCAGCAAATCAGAGCACTCCTGACAGAAGCCATCGCAAGAGGGGTCGACCAAGGAAAAACAGTATCACCAATAATCAGTGTGCTGACCCTAGGTCTGCATCAATAACCAAGGAAGACCATTTGACTGCCCAGCATGAGGATATTTCTTTGGAACCTGCTAGTCTGAGGTTGCAAAAGGATCATGAAGTAATAAAAGATGGTGAATTGAAAAATCAGGTACCTCTGAGGAAAATCAAAGTTTCCGCGACTACTGGACCAATAGCTGGTGAGAATATAGAAACAACAAATACAGAAGAGGATCAGGCCTTCGCTCAAACAAATGTTAAGAAAAGGAGGAAGCTTGATGCTCTGCCTAATAAAGATGTCAATGACTCCTGTACTGTTAAGCAGCTAACTGAGTCTATGACTAAGAAACTGACTGGACTTGAAGAAACCCCTCAAACAAGACCAAGGAGGAAGAGAACCCCTGTAAATGTTGAGGATTCTGAAATGCATGATTGCCATGAACCTTCAGTTGGTAGCAGGATCAAGGAAGACAGAAAAATTCAAAATCAAAATTTGAGAGTAGGATGCAGGCCTAGCTTTATTGTAACATATTTCTATCACAACATCATATGGTTTTATGATGGTGTTGTTGATTCTTATGACTCTGCCAAAGGAAAGCACAAGATTTTATATGCTGACGGTGACGTGGAAGTTTTAAACCTCAAAAAGCAGCGCTGGGAGCTAATTACAGATCATGCTTCACCAGATTCAGATCAAGACATTGACCTTCAGCAAATTGAGACGGTGACATCGGATACGTATGCTAGTCTTCTGTCTGATATAGGGCCTACTTGCTGCTTATCATGTTTTGCTTCAGCAAGATGCTGTATATGTGGACTGTTTGTTTTAAACACCTTGAATGATGTAATTATAAGAGAAGATAAAAGACAAGGAAAGTCGGCGTCCGAGTCAGCCAAGGGAGCGAAAGGCAATAGTTGCAGGACAAGGGGTAGAGCGTCTGCCAGAATCTCCAAATCGGAATCTGCAAAATCTGCCAGAAAATCAAAGGATGATTCCGTCGTTGATGAAACTGTTGTGGCTGATGAATCTGCAGTAACTAAGAATGAGCAAGACTCAGCTTTGAAGTCAAAAAACAGAAGATCGAAGATTCTTTCTGATAAGACGACCAAACCTAAAGATAATTCTGCGCTTGATGAACCCATTGTGGCTGATGAATCTGTTGATCCACCTAGAACTAAGAATGAGCAAGACTTAGCTGGGAAGTCAAGAACCAAGAGATCAAAGATTCTTTCTGATAAGAAAATGCTTGAACCTAATGATAATTCTACACCTGATGAACCCGTTGAAGTTGATGATCCTTCGGTTGATCCACCCAGAACTAACAATGAGCAAGACTCGGCTGGGAAGTCTAAAACCAAAAGATCGAAGATTCTCTCTGATAAGGAAAAGATCAAACCTGGAGATAATTCTGAACTTGATGAACCCATGGTGGCTGATGAATCAGCAGCTGATCCACCTATAACTAAGAATGAGCAAGACTTAGCTGGCAAGTCTAAAACCAAGAGATCGAATATTCTCTCTGATAAGGAAAAGATCGAACCTAAGAATAATTCTGCACTCGATGAACCCATTGAAGTTGATCATGACTCTGCAGTCGATCCACCTAGAATTAAGAATGAGCGAGACTTGGTTAGAAAGTCTAAAACCAAAAGAGCGAAGATTCTCTCTGACAAGGATGAGATTGAACCTAGGGATAATTCTCCACTTGATGAACTCATTGAAGCTGATGACTCTGCAGTTGGTCCACTTAGAACTAATGATGAGCAAGTCCCAGCTGGGAAGTCAAAAACCAGAAGATCAAAAATTCTCTCTAATAAGAAAATGATCAGACCTAGGGATAATTCTGCATTTGATGAACCCATTGAAGCTGGTGAATCTGCAGTTGATTCACCTAGAACTAAGAATGAGCAAGATTCAGCTGGGAAGTCTAAAACCAGAAGATCAAAGATTCTTTCTGATAAGAAAAAGATTGAACCTAAAGATAATTCTGCATCTGATGAACCCATTGAAGTTTATGACTCTGTAGTTGATCCACCTAGAACAAGGAATGAGCAAGACTTAGCTGGGAAGTGTAAAACCAGAAGATCAAAGATTCTTGCTGATAAGAAAAAGATCGAACCTAGGGATAATCATGCACTCAATGAGCCCATTGTGGCTGATGAATCAGCAGTTGATCCACCTAGACCTAATGATGAGCAAGACTCAGCTGGGAAGTCAAAAACCAGAAGACCAAAGATTCTTTCTGATGAGAAAAAGATCAAACCTAAAGATAGTTCTGCTCCTGATATACCCATTGTGGCTGATGAATCGGCAGCTGATCCACCTAGAACTAATGATGAGCAAGACATAGTTGGGAAGTCTAGAACCAGAAGATCAAAGATTCTTGCTGATAAGAAAAAGACTGAACCTGAAGATAATTCTGCACCTGATGAACCCATTGTGGCTGATGAATCAGCAGTTGACCCACCTAGAACTAAGGATGAGCAAAACTCAGTTGGGAAGTCTAGAACCAGAAGATCAAAGATTCTTTCTGATAAGGAAAAGATCGAACCTAAAGATAATTCTGCACTTGATGAACCAGTTGTGGCTGATGAATCAGCAGTTGACCCACCTAGAACTAAGGATGAGCAAACCTTAGTTGGGAAGTCTAGAACCAGAAGATCAAAGATTCTTTCTAATAAGAAAAGAACTGAACCTAAAGATAATTCTGCACCTGATGAACCCATTTTGGATGATGAACCAGCGGCTGATCCACCTAGAACTAATGACGAGCAAGACTTAGCCGGGAAGTCAAAAACCAGAAGATCAAAGATTCTATCTGATGAGGAAAAGATCATACCTAAAGATAATTCTGCACCTGATGAACCCATTGTGGATGATGAATCAGCGGCTGATCCACCTAGAACTAATGATGAGCAAGACTTAGCTGGGAAGCCAAAAACCAGAAGATCAAAGATTCTTTCTGATGAGGAAAAGATCATACCTAAAGATAATTCTGCACCTGATGAACCCATTGTGGATGATGAATCAGCAGCTGATCCACCTAGAACTAATGATGAACAAGACTCAGCTGGGAAATCAAAAGCCAAAAGGTTGACGGTGGTTTCTGATAAGAAAAGGATCAAACCTAGGGATGATTCTCCGCTTGATGAACCCGTTGAAGCTGATGAATCTGCAGTTGATCCTCCTCAAACTAATAATGAACAAGAGCCAGCTGGGAAGTCTAAAACCAAAAGACTGAAGATTGTTTCTGGTATGAAGAAGATCGAACCCGAGACTGATAACGTGCAGAAGTCAAAATTGCGGAAGGCTTGA 4944 0.4051 MAPPDREVLQSLVDVGDGLLNHPSSIDELLALLDLLQELENVLSTLDQEPDETVKEAILPSMKALISSELLRHSDEDVKISVTSCIAEITRITAPDAPYGDEHMKEIFKLTVEAFEKLSDVPSRSYDKALLIVDNVARVRSCLLMMDLECDDLIVQMFQIFLRVISSMPNHPEVVTYAIEAIMTMVLNESEEISADLLRPILDSLRKENQTTSPISWSLAEKVVTNCADKLQSYVMRAVQSMGRPLDAFAEIVVSICQRGSETLQRNHSNGFGNPLVQAGENELSVGKSADEQYCDDQEPDMTCARHVAQSMDDAKLNKRNPSSTVHSEIIKKKSEKKQPHSDLTKNEKRKNTKTNLENGNSKSLEKSSSEAELDVVPKKRGHKPNSLMNPEEGYDHSQICMDRKSENVGEVSQPKTGKTIQHKKAYDRDTGLPPSKNSASQKDKFLLEPENAVELSQHKTNKKSRKSSQVRKACDSGIELSPPVSHDLLKVASLKKSENKGCEASVSQRETDKNINAAHTSANQSTPDRSHRKRGRPRKNSITNNQCADPRSASITKEDHLTAQHEDISLEPASLRLQKDHEVIKDGELKNQVPLRKIKVSATTGPIAGENIETTNTEEDQAFAQTNVKKRRKLDALPNKDVNDSCTVKQLTESMTKKLTGLEETPQTRPRRKRTPVNVEDSEMHDCHEPSVGSRIKEDRKIQNQNLRVGCRPSFIVTYFYHNIIWFYDGVVDSYDSAKGKHKILYADGDVEVLNLKKQRWELITDHASPDSDQDIDLQQIETVTSDTYASLLSDIGPTCCLSCFASARCCICGLFVLNTLNDVIIREDKRQGKSASESAKGAKGNSCRTRGRASARISKSESAKSARKSKDDSVVDETVVADESAVTKNEQDSALKSKNRRSKILSDKTTKPKDNSALDEPIVADESVDPPRTKNEQDLAGKSRTKRSKILSDKKMLEPNDNSTPDEPVEVDDPSVDPPRTNNEQDSAGKSKTKRSKILSDKEKIKPGDNSELDEPMVADESAADPPITKNEQDLAGKSKTKRSNILSDKEKIEPKNNSALDEPIEVDHDSAVDPPRIKNERDLVRKSKTKRAKILSDKDEIEPRDNSPLDELIEADDSAVGPLRTNDEQVPAGKSKTRRSKILSNKKMIRPRDNSAFDEPIEAGESAVDSPRTKNEQDSAGKSKTRRSKILSDKKKIEPKDNSASDEPIEVYDSVVDPPRTRNEQDLAGKCKTRRSKILADKKKIEPRDNHALNEPIVADESAVDPPRPNDEQDSAGKSKTRRPKILSDEKKIKPKDSSAPDIPIVADESAADPPRTNDEQDIVGKSRTRRSKILADKKKTEPEDNSAPDEPIVADESAVDPPRTKDEQNSVGKSRTRRSKILSDKEKIEPKDNSALDEPVVADESAVDPPRTKDEQTLVGKSRTRRSKILSNKKRTEPKDNSAPDEPILDDEPAADPPRTNDEQDLAGKSKTRRSKILSDEEKIIPKDNSAPDEPIVDDESAADPPRTNDEQDLAGKPKTRRSKILSDEEKIIPKDNSAPDEPIVDDESAADPPRTNDEQDSAGKSKAKRLTVVSDKKRIKPRDDSPLDEPVEADESAVDPPQTNNEQEPAGKSKTKRLKIVSGMKKIEPETDNVQKSKLRKA 1647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0556 1647 MobiDBLite consensus disorder prediction 1316 1350 - -
Lele37g0556 1647 MobiDBLite consensus disorder prediction 856 879 - -
Lele37g0556 1647 MobiDBLite consensus disorder prediction 1037 1114 - -
Lele37g0556 1647 MobiDBLite consensus disorder prediction 406 483 - -
Lele37g0556 1647 MobiDBLite consensus disorder prediction 665 696 - -
Lele37g0556 1647 MobiDBLite consensus disorder prediction 1411 1426 - -
Lele37g0556 1647 Pfam Sister chromatid cohesion protein PDS5 protein 31 236 - -
Lele37g0556 1647 MobiDBLite consensus disorder prediction 326 356 - -
Lele37g0556 1647 SUPERFAMILY ARM repeat 39 271 IPR016024 -
Lele37g0556 1647 MobiDBLite consensus disorder prediction 1435 1592 - -
Lele37g0556 1647 MobiDBLite consensus disorder prediction 895 963 - -
Lele37g0556 1647 MobiDBLite consensus disorder prediction 509 526 - -
Lele37g0556 1647 MobiDBLite consensus disorder prediction 1615 1647 - -
Lele37g0556 1647 MobiDBLite consensus disorder prediction 658 696 - -
Lele37g0556 1647 Coils Coil 29 49 - -
Lele37g0556 1647 MobiDBLite consensus disorder prediction 989 1015 - -
Lele37g0556 1647 MobiDBLite consensus disorder prediction 831 1647 - -
Lele37g0556 1647 MobiDBLite consensus disorder prediction 1363 1402 - -
Lele37g0556 1647 MobiDBLite consensus disorder prediction 1268 1301 - -
Lele37g0556 1647 MobiDBLite consensus disorder prediction 313 394 - -
Lele37g0556 1647 MobiDBLite consensus disorder prediction 1220 1258 - -
Lele37g0556 1647 MobiDBLite consensus disorder prediction 368 387 - -
Lele37g0556 1647 MobiDBLite consensus disorder prediction 1172 1210 - -
Lele37g0556 1647 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 312 916 IPR039776 GO:0007064
Lele37g0556 1647 MobiDBLite consensus disorder prediction 496 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0556 Lele-ChrLele37 4598976 4613602 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0556 37 4598976 4613602 Lele42g0717 42 20204755 20207571 CCT
Lele37g0556 37 4598976 4613602 Lele43g0670 43 5988076 5990756 CCT
Lele37g0556 37 4598976 4613602 Lele44g0624 44 4934736 4937534 CCT
Lele37g0556 37 4598976 4613602 Lele39g0873 39 17655528 17663353 hybridization