Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0555 ATGGCGGATGAACAGAGACAATCTAGGAGCGTTATCTTCAACAAGTATGAGATTGGGAGGCTTCTCGGCCAAGGGAATTTCGCTAAGGTTTATTATGGAAGAAACCTTGTGACCAACGAGAGTGTTGCGATTAAGGTGATTAAGAAGGAGAAGCTTGAGAAAGGGAAGCTGAAGCTGATGAAGCAGATCAAGAGAGAAGTCTCGATAATGCGATTGGTTCGACACCCACACATAGTGGAGCTGAAAGAAGTCATGGCTACAAAGGGAAAGATCTTTCTGGTTATGGATTATGTTAAAGGCGGTGAACTGTTCGCTAAAGTCGCGAAAGGAAAATTGAACGAAGATTTAGCGAGAAAATATTTCCAGCAATTGATTTCCGCCGTCGATTTCTGTCACAGCCGCGGCGTCACTCACCGGGATCTCAAGCCTGAGAATCTGTTCCTCAACGAAAATGAGGATCTGAAGGTCTCCGACTTTGGCCTGTCGGCCTTGCCGGAGCAGCGCCGGTCCGACGGGATGCTCGTGACGCCGTGTGGGACGCCGTCTTACGTGGCGCCGGAGGTTTTGAATAAGAAAGGTTACGAGGGGTCGAAAGCAGATATCTGGTCTTGTGGCGTAATTCTCTATGCTCTGCTTTCTGGGTATCTTCCATTTCAAGGTGAGAATGTGATGAGAATTTACAAGAAAGCATTCAAAGCTCAATACGTATTACCAGATTGGATTTCACCGGAAGCAAAGAATTTGATCTCTAAATTACTAGTGGTCGACCCAGAAAAGAGATATTCGATCAATGAAATAATGAAGGATCCATGGTTTCAATATGGGTTCATGAGACCAATCGCATTTTCTATAAAGGAACCAAGATTAGAGGATTTCGCAGATGATAACATCGGAGAAGTGGAAGAAAAAATGGTGGGAGGACAGGGAAGTAGTGATGAAGATAATCACCAACAACAAGCACAATCCCAATCACGGCCATTTTACAATGCGTTTGAGATAATTTCGTCGTTGTCACATGGGTTTGATCTGAGGAGCTTGTTTGAGACGAGGAAGAGGTCGCCATCGATGTTCACGACAAAGTTCTCGGCAGCTGCGGTGGTGGGGAAGATGGAGGCGGTGGCGAGGAAGTTGAATCTGAGGATAACGGGGAAGAAGGAGTACATGGTGAGGATGCAGGGGTCGAAGGAGGGAAGGAAGGGGAAGTTGGGGGTGACGGTGGAGGTGTTCGAGGTGGCGCCGGAGGTGGCGGTGGTGGAGTTCTCAAAGTCCTCCGGCGACACCTTGGAGTATGTAAAGCTGTGTGAGGAACAAGTAAGACCAGCACTGAAAGATATCGTCTGGAGTTGGCAAGGGGATAACAATCCTCATCCACAAAGCTAA 1380 0.4732 MADEQRQSRSVIFNKYEIGRLLGQGNFAKVYYGRNLVTNESVAIKVIKKEKLEKGKLKLMKQIKREVSIMRLVRHPHIVELKEVMATKGKIFLVMDYVKGGELFAKVAKGKLNEDLARKYFQQLISAVDFCHSRGVTHRDLKPENLFLNENEDLKVSDFGLSALPEQRRSDGMLVTPCGTPSYVAPEVLNKKGYEGSKADIWSCGVILYALLSGYLPFQGENVMRIYKKAFKAQYVLPDWISPEAKNLISKLLVVDPEKRYSINEIMKDPWFQYGFMRPIAFSIKEPRLEDFADDNIGEVEEKMVGGQGSSDEDNHQQQAQSQSRPFYNAFEIISSLSHGFDLRSLFETRKRSPSMFTTKFSAAAVVGKMEAVARKLNLRITGKKEYMVRMQGSKEGRKGKLGVTVEVFEVAPEVAVVEFSKSSGDTLEYVKLCEEQVRPALKDIVWSWQGDNNPHPQS 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0555 459 FunFam Aurora kinase A 8 101 - -
Lele37g0555 459 Pfam NAF domain 327 382 IPR004041 GO:0007165
Lele37g0555 459 CDD CIPK_C 329 443 - -
Lele37g0555 459 Gene3D Phosphorylase Kinase; domain 1 1 97 - -
Lele37g0555 459 ProSiteProfiles NAF domain profile. 323 348 IPR018451 GO:0007165
Lele37g0555 459 ProSiteProfiles Protein kinase domain profile. 16 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g0555 459 SUPERFAMILY Protein kinase-like (PK-like) 12 273 IPR011009 -
Lele37g0555 459 FunFam Non-specific serine/threonine protein kinase 98 279 - -
Lele37g0555 459 Gene3D Transferase(Phosphotransferase) domain 1 98 276 - -
Lele37g0555 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Lele37g0555 459 Pfam Protein kinase domain 16 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g0555 459 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524
Lele37g0555 459 Gene3D Kinase associated domain 1, KA1 323 448 - -
Lele37g0555 459 FunFam Non-specific serine/threonine protein kinase 323 447 - -
Lele37g0555 459 SMART serkin_6 16 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g0555 459 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0555 Lele-ChrLele37 4590632 4592011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0555 7 454 CBL-interacting serine-threonine protein kinases AT5G10930 59.692 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele37g0555 Pkinase 1.5e-75 CL0016