Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0551 ATGGATTGTTCATCTTGGGTCAACACGTCCTTGGATCTCAATATCAGACCTTATCATCATATGCTTCATGAAGAAGTTCCAAAAAAGGAGGTGGAAAGCAATTTTTTCTCATCTGGGATGAAATCTTCTTTAAAAGACGAGTCATTTCAGACGTCAAGTGGTGCGTTGGAGGATGAACTGAAGAGGGTGAGTGCAGAGAACAAGAAGTTGACAGAAATGCTCACTGAGATGTGTGAGAATTACAATTCTCTGAGAAGACACTTAGCTGAATACATGAGAAACAATCCTCAAAAGGATCAAAACAACACTATCCCATCAAAGAGAAGGAAGTCTGATAACATCAGCAGCAGCAACAACACAAATAGTAATCCCATGGCCATTAATGTCACCTCAGAGAGCTGCTCAACTGATGAAGAATCATGCAAGAAACCTAAAGAAGGAACCAACAAAGCAAAAGTTTCCAAAGCTTATGTCAGGACCAAATCATCTGACACTAGCCTGATTGTGAAGGATGGATATCAATGGAGGAAATATGGGCAAAAAGTGACCAGAGATAACCCTTCTCCAAGAGCATACTTTAAATGCTCTTTTGCTCCAAGCTGTCCTGTAAAAAAGAAGGTGCAAAGAAGTGTGGAAGATCAATCTATTCTGGTAGCAACATATCTAGGGGAGCACAATCATCCTCATCCTTCTCAGATGGAGACAACAACAACAACAGGATCTAATCGTTTTGTGAGCCAAGCTTCAGTACCATGTTCATCAGCATCTCTGAACTCTTCCTCTGCACCTGCAACAATTACGTTTGACTTGAAAAAATCCAAGTCCAGCGGCCCCAACAACATGAATGCTGCCGCCGCCCCAACCACCAAGAACCCTACACCGAAACTCGATTCGCCGGAAGTCCCTCAGGTTTTGGTGGAACATATGGCCTCTTCCTTGACTAAAGATCCCAATTTCAGAGCAGCACTTGTTGCCGCCATTTCAGGAAGAATATCCCATGTGAATTAA 1008 0.4256 MDCSSWVNTSLDLNIRPYHHMLHEEVPKKEVESNFFSSGMKSSLKDESFQTSSGALEDELKRVSAENKKLTEMLTEMCENYNSLRRHLAEYMRNNPQKDQNNTIPSKRRKSDNISSSNNTNSNPMAINVTSESCSTDEESCKKPKEGTNKAKVSKAYVRTKSSDTSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSILVATYLGEHNHPHPSQMETTTTTGSNRFVSQASVPCSSASLNSSSAPATITFDLKKSKSSGPNNMNAAAAPTTKNPTPKLDSPEVPQVLVEHMASSLTKDPNFRAALVAAISGRISHVN 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0551 335 MobiDBLite consensus disorder prediction 272 296 - -
Lele37g0551 335 Pfam WRKY DNA -binding domain 170 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele37g0551 335 SMART WRKY_cls 169 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele37g0551 335 FunFam WRKY transcription factor 40 154 231 - -
Lele37g0551 335 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 35 331 IPR044810 GO:0003700
Lele37g0551 335 Coils Coil 53 80 - -
Lele37g0551 335 MobiDBLite consensus disorder prediction 94 149 - -
Lele37g0551 335 ProSiteProfiles WRKY domain profile. 164 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele37g0551 335 SUPERFAMILY WRKY DNA-binding domain 165 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele37g0551 335 MobiDBLite consensus disorder prediction 272 298 - -
Lele37g0551 335 MobiDBLite consensus disorder prediction 94 135 - -
Lele37g0551 335 Gene3D WRKY domain 151 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0551 Lele-ChrLele37 4542742 4544253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0551 4 335 WRKY Transcription Factor Family AT1G80840 48.246 4.46e-93 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele37g0551 WRKY 1.2e-22 CL0274