Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0542 ATGAGTAATTTTCTAGTTATGTTCCTGGTCATTTGGGTATCAAGCTTTTCTCCTTCAGTTTCTCATTTTTTCGCAAATGCTCAAGCTGAATCTCCAGGTATTGCGGAGGTTAGAGCAGGGCACCATCAGAATTTGGACAAGAGAATTCTAATAGCACTTATTGTTTGTTCTGCCCTTCTTGTTTCAATCTTCCTATTGTTAACATATATCTGGTGTCATCGACACAAAATCTTCAAAGTTCCCAGTTCTAAAAGCCCCAAGACCATCGAAGCTGCAAAAGGGGTGTCACTTAGCCCTGTTGATGTTAAATTTAATTACTCAAAAATGGTAGACAAGAAGAGTTCAATTGCTATATTTGACTTTCAATTGTTAGAGGTTGCAACAAACAGCTTTGACAAAAGTAATATTCTGGGTGAGAGTGGTTCTAGGCTAGTGTACAGAGCTTGTTTTGATGAGCATCTCAAGGCAGCTGTGAAGAAAGCAGATAGCAGTGCTGATAGAGAATTTGAGGTAAGGAATGAAGTGAATTGGTTAAGCAAGATTCGGCATCAGAATATCATTAAACTTCTTGGTTACTGTATTCATGGTGAATCAAGGTTTCTTGTTTATGAAATGATGGAGAATGGATCTTTGGAAACTCAATTACATGGGCCTAGTCATGGATCACCTTTAAATTGGCACCTTCGGTTAAAGATCGCCGTTGATGTTGCCAGGGCATTAGAATATCTCCATGAGCACTCTAATCCTCCTGTGGTTCATAGAGAACTACAATCTTCTAATGTTCTTCTGGATTCTCACTTTAATGCCAAGCTATCAGATTTTGGGCTTGCTGTAAGTTCTGTAATGCAAGACAAGAACATAAAGATGTCGGGAACTTTGGGTTACGTAGCACCTGAGTACATATCACATGGTAAGCTAACTGATAAGAGTGATGTATATGCTTTTGGAGTTGTCCTTCTAGAGCTTATAACAGGAAGAAAAGCCATGGACAAGATGTCTTCAGACCAATACCAATCCATTGTCACATGGGCCATGCCTCAGCTAACTGACAGATCAAAGCTTCCAAGTATTATAGATCCTGTAATGAGAAACACAATGGATTTGAAGCATTTATATCAGATTGCTGCAGTAGCTGTACTTTGTGTACAACCAGAACCAAGTTATCGGCCACTAATAACCGATGTCCTACACTCTCTCATCCCTTTGGTACCGACGGAGCTAGGAGGGTCGCTCAGAGTTTCAGAATCAGTCTGCTCCGAGAATTTGCAATGA 1272 0.4002 MSNFLVMFLVIWVSSFSPSVSHFFANAQAESPGIAEVRAGHHQNLDKRILIALIVCSALLVSIFLLLTYIWCHRHKIFKVPSSKSPKTIEAAKGVSLSPVDVKFNYSKMVDKKSSIAIFDFQLLEVATNSFDKSNILGESGSRLVYRACFDEHLKAAVKKADSSADREFEVRNEVNWLSKIRHQNIIKLLGYCIHGESRFLVYEMMENGSLETQLHGPSHGSPLNWHLRLKIAVDVARALEYLHEHSNPPVVHRELQSSNVLLDSHFNAKLSDFGLAVSSVMQDKNIKMSGTLGYVAPEYISHGKLTDKSDVYAFGVVLLELITGRKAMDKMSSDQYQSIVTWAMPQLTDRSKLPSIIDPVMRNTMDLKHLYQIAAVAVLCVQPEPSYRPLITDVLHSLIPLVPTELGGSLRVSESVCSENLQ 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0542 423 SUPERFAMILY Protein kinase-like (PK-like) 109 399 IPR011009 -
Lele37g0542 423 Pfam Protein tyrosine and serine/threonine kinase 145 367 IPR001245 GO:0004672|GO:0006468
Lele37g0542 423 Gene3D Phosphorylase Kinase; domain 1 97 205 - -
Lele37g0542 423 PANTHER OS01G0750732 PROTEIN 31 404 - -
Lele37g0542 423 Gene3D Transferase(Phosphotransferase) domain 1 206 406 - -
Lele37g0542 423 ProSiteProfiles Protein kinase domain profile. 131 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g0542 423 FunFam probable receptor-like protein kinase At1g80640 206 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0542 Lele-ChrLele37 4454912 4458378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0542 10 345 Receptor kinase-like Gene Family AT1G80640 47.059 2.05e-101 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Lele37g0542 PK_Tyr_Ser-Thr 6.7e-43 CL0016