Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0530 ATGGATGAGATCGATTTCTTCAATCAATCACACAAGACTTATTCTTTTGATGATGATGAAGAGTTTCTTATGGAGATCTTTCGCCAACCTTCTTTCTCTTCTGAGAGTGACAGTACTCATTCTTCCTCTATTCAAAACAACCCCGTCACCGCCGCATCGGATCCTTGTGGTGGGGTTGCCACCGCCGCCACAGCCACAACACCCAACGTTAACAGCTTATCTTTGGATAATAATGACTCCTCCGGCGTCGGCAGCCAGCTGAAGCGTAATAGCTCGAGCTCCAGCTCAATAGCCTCGAAACTTAGTAACTTGTCGGACAAACCTGTGGTAGTAGCCTCGTCGTCGTCTCCGTCAACTTATATTCTGTCTTTCGATAACTCAACAGTACTACCAGCCACCTCCGACGTCGACGGTTACCGGAAACATGATGAATCCGCCATGAAGAGTGGTAATCAGGAGAAATTAGCGAGTAGTACACGAGGAGGAGGAGGAGGAGGCATACGCGCTTCTCAAAAGCGAACCCTAGAAAACCATAATAGTGATCATCAACCGAAAGCTAATCAAGGGACAAAGAAGACTAGAAGTTCATCTGAGTCATTGGATCACATAATGGCTGAGAGAAAAAGGAGACAAGAACTCACTGAGAAGTTCATTGCACTCTCTGCTACAATTCCTGGTCTCAAGAAGATTGACAAGGCTTCTATACTAAGCGAAGCTATCATTCACGTGAAGCAACTTAAAGAACGAGTGAGAGAGTTAGAGGAACAGAACAAGAAGATGATGACTACTAATATGGAGCAGTCAGTGTCGTACATGAAGAAGAAGAAGAAGAAGAGGTCGTCGTTGTCACCGTCGCTGCCGAGACAAGATAATATTGAAGACACGACGACGACGTCTTGTGAAATAATGAGCTCTGATGATTACTTTAAAATTAGTGAATCACTTCCAGAAGTTGAAGCAAGAGTTTTACAGAGGCAAGTCCTCATCAGAATCCACTGTGAGAATGAAAAAGGAGTTATTATTAACTTATTGGCTCAGCTCCATGGTCTTCATTTCTCCATAATCAGTGACAGTGTGTTGCCATTTGGAAATTCTACTCTTGATATTACCATTGTTGCTGAGGTCGATGAGGAACACAAGATAGCAGTGAAGGAACTTGTGAAAAAGCTGAGAATGACTCTGTTGAAGTCAGCTGACTGA 1200 0.4375 MDEIDFFNQSHKTYSFDDDEEFLMEIFRQPSFSSESDSTHSSSIQNNPVTAASDPCGGVATAATATTPNVNSLSLDNNDSSGVGSQLKRNSSSSSSIASKLSNLSDKPVVVASSSSPSTYILSFDNSTVLPATSDVDGYRKHDESAMKSGNQEKLASSTRGGGGGGIRASQKRTLENHNSDHQPKANQGTKKTRSSSESLDHIMAERKRRQELTEKFIALSATIPGLKKIDKASILSEAIIHVKQLKERVRELEEQNKKMMTTNMEQSVSYMKKKKKKRSSLSPSLPRQDNIEDTTTTSCEIMSSDDYFKISESLPEVEARVLQRQVLIRIHCENEKGVIINLLAQLHGLHFSIISDSVLPFGNSTLDITIVAEVDEEHKIAVKELVKKLRMTLLKSAD 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0530 399 MobiDBLite consensus disorder prediction 265 296 - -
Lele37g0530 399 PANTHER BHLH TRANSCRIPTION FACTOR 23 396 - -
Lele37g0530 399 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 201 268 IPR036638 GO:0046983
Lele37g0530 399 MobiDBLite consensus disorder prediction 32 110 - -
Lele37g0530 399 MobiDBLite consensus disorder prediction 60 110 - -
Lele37g0530 399 SMART finulus 203 252 IPR011598 GO:0046983
Lele37g0530 399 MobiDBLite consensus disorder prediction 32 52 - -
Lele37g0530 399 Coils Coil 236 263 - -
Lele37g0530 399 Pfam Helix-loop-helix DNA-binding domain 202 247 IPR011598 GO:0046983
Lele37g0530 399 Gene3D - 186 264 IPR036638 GO:0046983
Lele37g0530 399 MobiDBLite consensus disorder prediction 174 188 - -
Lele37g0530 399 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 197 246 IPR011598 GO:0046983
Lele37g0530 399 MobiDBLite consensus disorder prediction 141 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0530 Lele-ChrLele37 4397394 4400605 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0530 201 394 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 42.268 7.77e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele37g0530 HLH 1.5e-07 No_clan