Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0529 ATGTCTGAAATAATGTTGCAGGACATGGATGATGCTGAAGACTTCCACGACCAGTTTTGTCACATGATGGTGTCTTTTGATGAGGAAGACCAAGAGTTTCTCAGAAACATTCTTCAGCAGCAGCCAGCTGCTGGTGGTGGAAATAACAATAAGATTAAGAATAATGAGCTGTCTTCTTCTTCTCAAAGCGAAGAAGATAAATCCTTTCCCACCATTGATTTCTCTACCGATGGCTCCGGCAACCGTGGTGGTAGTGGTGGTGGTTCGAATGTTGCCAACAAAAACCGTGTGATGTCTGCTAAATCATACATTTTATCATTTGATCAATCCAACGTAATACCAGCAGAAGAAGAAACAATGTCAAAACAAGAAGAATCTAGTACCTCTGAACTTTGTTCATTAAAAAGGATCAGAGAGACAGGTAATAATGTTGAGCCCAGAAAGAAGACGAGAAGCTGTTCAGAGACTGCAAATCACATAATGGCAGAGAGGAGGAGGAGGCAGCAACTCACAGAGAGATTTATTGCACTTTCTGCAACTATTCCGGGCTTGAAGAAGATGGACAAAGCTACAATTCTTCAAGAAGCGACCAAATACGTGAAGCAGCTTCAAGAACGAGTAACAGTGCTAGAGAAACAAAATAGTGTAATCAACAGCACAACAACAACATTAGAGTCATCAATGATATCGATAAAGAAATGTGAGCTACACAGAATTAATGATGATGATCTGTGTTGTGAAGCAAATGATCAAGTGTTGCCTCAGATTGATGCGAAAGTGTTGGAGAATCAAGTGCTGTTTGGAATCTATTGTGAGAAGCAAAAGGGCATTGAGTTTAAAATATTGACTTTGCTTGAAAATTTGCATCTTCATGTCACCAGTAGCAGCGTCTTGCCATTTGGGAATTCCACTCTTGGCATCACCATCATTGCCCAGATGGGAGAGGAATACAGAATGACAGTGAATGAAGTGATGAAAAACCTAAGACAAGTTCTGTCAAAGACCCACGATGCTGATCCGTACTAG 1026 0.4074 MSEIMLQDMDDAEDFHDQFCHMMVSFDEEDQEFLRNILQQQPAAGGGNNNKIKNNELSSSSQSEEDKSFPTIDFSTDGSGNRGGSGGGSNVANKNRVMSAKSYILSFDQSNVIPAEEETMSKQEESSTSELCSLKRIRETGNNVEPRKKTRSCSETANHIMAERRRRQQLTERFIALSATIPGLKKMDKATILQEATKYVKQLQERVTVLEKQNSVINSTTTTLESSMISIKKCELHRINDDDLCCEANDQVLPQIDAKVLENQVLFGIYCEKQKGIEFKILTLLENLHLHVTSSSVLPFGNSTLGITIIAQMGEEYRMTVNEVMKNLRQVLSKTHDADPY 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0529 341 SMART finulus 160 209 IPR011598 GO:0046983
Lele37g0529 341 Gene3D - 153 226 IPR036638 GO:0046983
Lele37g0529 341 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 154 203 IPR011598 GO:0046983
Lele37g0529 341 MobiDBLite consensus disorder prediction 41 93 - -
Lele37g0529 341 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 157 224 IPR036638 GO:0046983
Lele37g0529 341 Pfam Helix-loop-helix DNA-binding domain 157 204 IPR011598 GO:0046983
Lele37g0529 341 Coils Coil 193 220 - -
Lele37g0529 341 PANTHER BHLH TRANSCRIPTION FACTOR 23 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0529 Lele-ChrLele37 4389578 4391916 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0529 150 333 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 47.120 1.17e-41 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele37g0529 HLH 3.1e-11 No_clan