Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0527 ATGTCCACTAGTTCAATCGAGGAGACTAGAGGCGTCATGCATCTCTATCGTGTGGATCCCACTTCCCCATCGCCTATTGATCTTCCTGTTGGACGTAAACTACTTGTCTGTGTGCTTGGAGTGCCAAATCACATGACATATGCAGATTTTTGCCAGTTCTGTTGTCCATTTATTCAGCATATCTTAGAGCTGAGGATTGTCAGAAATGATGGGATGGAGGATCAGTATAGTGTTTTAATTCGTTTTGATGACCAATATTCTACAGATGGTTTCTACAAGCATTATAATGGGCATCGTTTCTCATCTATGGAGAACATGCCTAGGACTGCAAAAAGTTCATCTGTATTCTTTGGGCTGCTTTTTGGGTATGCCGGTATTGTCAGCGGCAGGCTGAAAAATCTATATGTTTTGTTTGTCAAACTACTGAAAACCTCAGCATGTGTTATTTGTGGGTTTGTTGGCTGTGGAAAATACAAAGCAGAGCATGCCAAAATACACTGGAAAGACACACAGCATTGCTACTTCCAAGAAGTGGAAACACAACGAGTATGGGATTATGTGAAAGACAACTATGTTCGTAGACTAATCCTGTCCAAAACCGATGGGAAGTTGGTTGAGTTAAACTCTCACTGTGAGCACACAGGCAATGGATGGGGAAGTTGCAGCTGTGAAGATAATGCTATGAGTGAGGCTATACATAACAGTAAAGTCGAAGCTAAGCTGCAGTCCAAGCTTGACAGATGTTATAAGGAGGAGAAAGTTTTGGATGATCTAAATGAGAATCTGCTGAAAAATCAGGAGATCTGGAAAGCCAAGATACTTGAGATTGAAGAAAGTTATGCTTTTAATAGTGCCTCTAATGTTTTCTTTTCTCTCGGATACGGCCTCCTCATGAGTATGTATGGCGTCATGAACACGCATGTGTTAAGAGATCTCATGATTTGTCTTGAAAATGGGAAGACAGCTGAAAATCTGTCCGGATATTGTTCCATAAGAGTGTTACTGTTCTCAGTTAAACTTGAAGCTAAACCAGATCACTTCCTTGATCTTTCTCCAATGAAGAATTCCTTCTGTCTCCCTTTTCTGGGAATGAACGACGATGAACAACTGGTCTGCCATGAAAGCACTTCACAGAACCCTGATGACGACTTAATATTTTCCTATAATAATCTTGTGTCTTTCGATAACTCTAATGTTCTTGAGAGAGGACCAAGTACTATACAACAACCTTGTACGAAACAAGAAGAATATATAGCTCATGATGATGATGATTCTGTGCATCGATTTGGAAATAGCAGGAACCGAGGAACAAGGAAGGGTCGTCGGAACCCTGAATCTGGGACATTGGATCACGTTGGGGCTGAGAGAAGTAGACAACACGAATTGGCTCAGAAATTCACTGCTCTTTCTGCTACTATTCCTGGCTTGAAAAAGGGTCACCTATCATATTAG 1452 0.4112 MSTSSIEETRGVMHLYRVDPTSPSPIDLPVGRKLLVCVLGVPNHMTYADFCQFCCPFIQHILELRIVRNDGMEDQYSVLIRFDDQYSTDGFYKHYNGHRFSSMENMPRTAKSSSVFFGLLFGYAGIVSGRLKNLYVLFVKLLKTSACVICGFVGCGKYKAEHAKIHWKDTQHCYFQEVETQRVWDYVKDNYVRRLILSKTDGKLVELNSHCEHTGNGWGSCSCEDNAMSEAIHNSKVEAKLQSKLDRCYKEEKVLDDLNENLLKNQEIWKAKILEIEESYAFNSASNVFFSLGYGLLMSMYGVMNTHVLRDLMICLENGKTAENLSGYCSIRVLLFSVKLEAKPDHFLDLSPMKNSFCLPFLGMNDDEQLVCHESTSQNPDDDLIFSYNNLVSFDNSNVLERGPSTIQQPCTKQEEYIAHDDDDSVHRFGNSRNRGTRKGRRNPESGTLDHVGAERSRQHELAQKFTALSATIPGLKKGHLSY 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0527 483 Pfam BRCA1-associated protein 2 29 105 IPR011422 -
Lele37g0527 483 ProSiteProfiles Zinc finger UBP-type profile. 112 211 IPR001607 GO:0008270
Lele37g0527 483 CDD RRM_BRAP2_like 36 104 - -
Lele37g0527 483 MobiDBLite consensus disorder prediction 423 455 - -
Lele37g0527 483 SMART Zf_UBP_1 127 183 IPR001607 GO:0008270
Lele37g0527 483 Pfam Zn-finger in ubiquitin-hydrolases and other protein 146 193 IPR001607 GO:0008270
Lele37g0527 483 MobiDBLite consensus disorder prediction 438 455 - -
Lele37g0527 483 SUPERFAMILY RING/U-box 145 198 - -
Lele37g0527 483 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 140 217 IPR013083 -
Lele37g0527 483 PANTHER BRCA1-ASSOCIATED PROTEIN 240 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0527 Lele-ChrLele37 4359818 4366774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0527 435 478 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22750 50.000 1.11e-06 48.5