Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0512 ATGACCGGCGATACTTCCTATTCTGCGGACAACAAGAGCTTGTCGCCGAGTCAAAACCTCGACATCACGATAGAGGAAGGATCTCCAAGCAGTGAGCAATTGCTTGATGTCGAGGGTGAGTGCAATGACTTTGAAAATGACTGTGGGCAGCTATTTGAGATTGATGGAGATGATCATGAAAATGGGAGAGATGAAATGGAGATTGCTGATTTTCACAATGGGGAATCTCAAGTAAAAGACTACCCTCCACCAGTAGTAGGGATGGAATTTGATGCATATGATGATGCTTATAATTACTATAATGGCTATGCCAAGGAACTTGGTTTTGCTATTAGGGTTAAATCATCATGGACCAAACGTAACAGCAAAGAGAAACGTGGTGCTGTGCTCTGCTGCAACTGTGAGGGTTTCAAAACAGTTAAGGAAGCAAGTAGTCGTAGGAAAGAAACAAGAACAGGTTGTCTAGCAATGATTAGGTTAAGATTAGTGGAATCTAACAGGTGGAGAGTGGATGAAGTCAAGCTTGAGCATAACCATTCATTTGATCCTGAGAGAGTACAAAACTCTAAATCACATAAGAGGATGGAAAGTGGGGCCAAAAGAAAGATTGAGCCAACTGTAGACGTTGAAGTAAGAACAATCAAGTTATATCGAACTCCTGTTATGGATTCATCAAGTTATAGAAGCTTAAAAGCTAATGAAGAAGGAACTAGTGACCATGCTAATTTTTACAAGCATTTAAGACTTAGAAAAGGGGATGCAGAGCTCTCAAAACTGTACACAAATGCAGTATTCAGCAAGTTCCAAGATGAAGTGGTGATGATGTCTTCTTGTCTCAGCATCACTGAATTTCAAGCAAATGGGTCTATAGTGACGTACATAGTTAAAGAACACATAGAGGAAGAATCGATGAGCGATGTCCGGCAGTTCGAAGTCATGTATGATAAAGCCGGAGCAGAAGTTCGCTGTGGCTGTAACTGCTTTAACTTGAAAGGCTATCTATGCCGGCATGCCTTGTGTATCCTTAATTACAATGGTTTGGAGGAAATTCCATGTCGGTATATTTTGTCCAGATGGAGGAAGGATTATAAGAGATTGTATGTACCAAATCTCAGCTGCAACAATATTGATATCACCAACCCTGTTCAGTGTTATGATCATTTGTACAGAAGGGCCATGCAAGTTGTTGAAGAAGGAATGGTATCCCAAGATCATTATATGGTTGCTTGGCAGGCATTTAAAGAGTCATTGAACAAGGTACGCCTTGTAGCAACAGACAAGATTGAATAA 1290 0.4062 MTGDTSYSADNKSLSPSQNLDITIEEGSPSSEQLLDVEGECNDFENDCGQLFEIDGDDHENGRDEMEIADFHNGESQVKDYPPPVVGMEFDAYDDAYNYYNGYAKELGFAIRVKSSWTKRNSKEKRGAVLCCNCEGFKTVKEASSRRKETRTGCLAMIRLRLVESNRWRVDEVKLEHNHSFDPERVQNSKSHKRMESGAKRKIEPTVDVEVRTIKLYRTPVMDSSSYRSLKANEEGTSDHANFYKHLRLRKGDAELSKLYTNAVFSKFQDEVVMMSSCLSITEFQANGSIVTYIVKEHIEEESMSDVRQFEVMYDKAGAEVRCGCNCFNLKGYLCRHALCILNYNGLEEIPCRYILSRWRKDYKRLYVPNLSCNNIDITNPVQCYDHLYRRAMQVVEEGMVSQDHYMVAWQAFKESLNKVRLVATDKIE 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0512 429 MobiDBLite consensus disorder prediction 1 24 - -
Lele37g0512 429 ProSiteProfiles Zinc finger SWIM-type profile. 310 346 IPR007527 GO:0008270
Lele37g0512 429 Pfam FAR1 DNA-binding domain 98 182 IPR004330 -
Lele37g0512 429 SMART 26again6 321 348 IPR006564 GO:0008270
Lele37g0512 429 MobiDBLite consensus disorder prediction 182 201 - -
Lele37g0512 429 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 75 211 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0512 Lele-ChrLele37 4159566 4162443 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lele37g0512 FAR1 8.8e-25 CL0274