Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0506 ATGGCCGTTACATCTTTCACTTTATCTTCTCTGCTTCAACCCTCCACTTCTTCTATTTCTTCTTACTTCCTTGGTGGGGTCCATCTCCATTCCCATGAAAGCTTCATCTGTATCCATTCGCTTTATACGACGTCAAATACAGAGGTCCCTTCTTCTAGGCGCCTGCAAATAGTGGCTGTTGCTTCTGGTGACTATTATTCTGCTCTTGGAGTTCCCAAATCCGCCACAAGCAAGGAAATTAAAGCGGCTTATCGAAGGTTAGCTCGCCAGTACCACCCTGATGTGAATAAGGAGCCTGGAGCAACTGAAAAGTTAAAAGAGATTAGTGCTGCATATGAGGTGCTATCAGATGATAAAAAGAGGGCTTTATATGATCAATATGGAGAGGCTGGAGTTAATGGCACAATGGGAGGAGCATCTAGTGCTTATGCGACTAATCCCTTTGATTTATTCGAGACATTTTTTGGGCCAAATGTGGGTGGCTTCTCTGGGATGGATCCAGCTGGATTTGGAACACGTCGTCGCAGTACTGTTACTAAGGGAGAAGATATCCGTTATGACATGTCATTGGAATTTTCTGAGGTAATTTCTGGAGCAGAGAAAGAATTTGATCTTTCTCATTTGGAAACCTGTGAAGTTTGTATTGGCACTGGAGCAAAGATGGGCTCCAAGATGAGAGTGTGCTCAACTTGTGGTGGTAGGGGTCAGGTGATGAGGACTGAACAAACACCTTTTGGAATGTTCTCTCAGGTTTCAGTATGTCCAAACTGTGGAGGGGATGGCGAAGTCATATCTGAATATTGTGGTAAATGCAGCGGGAAAGGACGTCTACGAGTTAAGAAGAAAATTAAAGTTAAAGTTCCACCTGGAGTTAGCTCAGGCAGTATATTAAGAGTTGCTGGGGAGGGTGATGCTGGACCAAGAGGGGGTCCTCCAGGAGATCTTTACGTATTTCTTGATGTGAAAGAAATACCAGGGATTGAAAGAGATGGTATTAATCTCTGTTCAACAATCACAATCGGTTATCTAGATGCCATACTTGGTGCCAGTGCCAAGATACCTCCTGGTACCCAACCTGGAGATATCCTTGTCCTTGCAAGAAAAGGCGTTCCAAAATTAAACAAACCATCAATACGTGGTGATCATTTGTTTACGGTTAAAGTTAGTATACCAAAACGTGTCAGGAAGTACAGAAGAAAAATCAAGCAGAAAGTTTTGCATATTCCTTATTCGCTTTGCTTTGTATATTTAGGCAATAGGCAGTTTATACAGGATCACTTGTTCAAGGATTCAGAGTGTATTCCATTAGCAGTTGACTCTAGGAAGAAATATTGTATATTTGATAGGAAGTTTAGGCTCTGTTTGAGAGAATCACTGAAAACTCACTGA 1389 0.4219 MAVTSFTLSSLLQPSTSSISSYFLGGVHLHSHESFICIHSLYTTSNTEVPSSRRLQIVAVASGDYYSALGVPKSATSKEIKAAYRRLARQYHPDVNKEPGATEKLKEISAAYEVLSDDKKRALYDQYGEAGVNGTMGGASSAYATNPFDLFETFFGPNVGGFSGMDPAGFGTRRRSTVTKGEDIRYDMSLEFSEVISGAEKEFDLSHLETCEVCIGTGAKMGSKMRVCSTCGGRGQVMRTEQTPFGMFSQVSVCPNCGGDGEVISEYCGKCSGKGRLRVKKKIKVKVPPGVSSGSILRVAGEGDAGPRGGPPGDLYVFLDVKEIPGIERDGINLCSTITIGYLDAILGASAKIPPGTQPGDILVLARKGVPKLNKPSIRGDHLFTVKVSIPKRVRKYRRKIKQKVLHIPYSLCFVYLGNRQFIQDHLFKDSECIPLAVDSRKKYCIFDRKFRLCLRESLKTH 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0506 462 CDD DnaJ 64 117 IPR001623 -
Lele37g0506 462 Hamap Chaperone protein DnaJ [dnaJ]. 61 431 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Lele37g0506 462 FunFam Putative Mitochondrial DnaJ chaperone 272 317 - -
Lele37g0506 462 FunFam Chaperone protein dnaJ A6 chloroplastic 211 275 - -
Lele37g0506 462 SUPERFAMILY Chaperone J-domain 61 169 IPR036869 -
Lele37g0506 462 Pfam DnaJ C terminal domain 184 391 IPR002939 -
Lele37g0506 462 Gene3D - 211 275 - -
Lele37g0506 462 Pfam DnaJ domain 64 125 IPR001623 -
Lele37g0506 462 CDD DnaJ_C 182 393 - -
Lele37g0506 462 Pfam DnaJ central domain 211 275 IPR001305 GO:0031072|GO:0051082
Lele37g0506 462 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 40 400 - -
Lele37g0506 462 SUPERFAMILY HSP40/DnaJ peptide-binding domain 328 395 IPR008971 GO:0006457|GO:0051082
Lele37g0506 462 Gene3D - 181 317 - -
Lele37g0506 462 ProSiteProfiles dnaJ domain profile. 64 128 IPR001623 -
Lele37g0506 462 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 198 278 IPR036410 -
Lele37g0506 462 ProSiteProfiles Zinc finger CR-type profile. 198 280 IPR001305 GO:0031072|GO:0051082
Lele37g0506 462 SMART dnaj_3 63 120 IPR001623 -
Lele37g0506 462 Gene3D - 327 406 - -
Lele37g0506 462 PRINTS DnaJ domain signature 120 139 IPR001623 -
Lele37g0506 462 PRINTS DnaJ domain signature 66 84 IPR001623 -
Lele37g0506 462 PRINTS DnaJ domain signature 100 120 IPR001623 -
Lele37g0506 462 PRINTS DnaJ domain signature 84 99 IPR001623 -
Lele37g0506 462 SUPERFAMILY HSP40/DnaJ peptide-binding domain 179 322 IPR008971 GO:0006457|GO:0051082
Lele37g0506 462 FunFam Chaperone protein dnaJ A6 chloroplastic 61 167 - -
Lele37g0506 462 Gene3D DnaJ domain 61 165 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0506 Lele-ChrLele37 4122922 4128201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0506 65 171 C2H2 Transcription Factor Family AT1G74250 37.719 6.04e-10 59.7