Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0504 ATGGGTATGACATTTTGCCCTATATTTTTCTGTGCAAAGGGTTCAGATCGAAAAGCACGAAGTAAGAAAGTGTCTACGTGGAGAGTGTTTTCTTTGAAGGAACTACACTCAGCGACAAATAATTTTAACTATGATAACAAGCTTGGAGAAGGGGGATTTGGCAGTGTATACTGGGGCCATCTTTGGGATGGATCACAAATTGCAGTGAAAAGATTAAAAGTTTGGAGCAACAAAGCAGATATGGAATTTGCTGCTGAAGTTGAGATATTGGCTAGAGTAAGACACAAGAATCTTCTTAGTCTACGTGGCTATTGTGCCGAAGGGCAGGAAAGACTAATCGTATATGATTATATGCCGAATTTGAGCCTACTCTCTCATCTCCATAGACAGCACTCTGCAGATGGCCTTCTTAATTGGAACAGGCGCATGAATATCGCAATTGGGTCTGCCGAGGGAATCGTATATCTTCACCACCAAGCAGAACCCCACATAATCCACAGGGATATCAAATCAAGCAATGTGTTACTGGATGCCGATTTCCAGGCTCGGGTTGCTGATTTCGGTTTTGCTAAGTTGATTCCTGATGGGGCAACCCACGTGACCACAAGAGTCAAAGGAACCCTCGGCTACCTCGCGCCGGAGTACGCCATGCTTGGTAAGGCATCTGAGAGTTGTGACGTCTATAGTTTTGGGATTCTCCTGCTAGAACTCGCAAGTGGCAAGAAACCAATAGAAAAACTAAGTACTTCGATGAAGCGATCGATAGCTGATTGGGCGCTACCATTGGTTATTGAGAAGAGATTTAGTCAACTTGCAGATCCAAAGCTGAAGGGTAAGTATGTGGAGGAAGAACTCAGAAGAATGATTCTTGTTGGACTTGTATGTGCTCAAAGTCAGCCCGAGAAGAGACCCACCATGCTCGAGGTGGTTGAGCTACTTAAGGGAGAATCTAAGGATAAGTTATCCGAGTTAGAAAAGAATGAATTGTTCACAAACCCTCTAGCTTTAGAAAACAGTGATGGAGCTTCAGTTGCTGAAGATAGTTCAGACTTCATCTCAGAGGAGAAGGAATCAACATTTGAGATGAAAGAGAGTAGTGGGCTATAG 1107 0.4363 MGMTFCPIFFCAKGSDRKARSKKVSTWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGHLWDGSQIAVKRLKVWSNKADMEFAAEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHRQHSADGLLNWNRRMNIAIGSAEGIVYLHHQAEPHIIHRDIKSSNVLLDADFQARVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKLSTSMKRSIADWALPLVIEKRFSQLADPKLKGKYVEEELRRMILVGLVCAQSQPEKRPTMLEVVELLKGESKDKLSELEKNELFTNPLALENSDGASVAEDSSDFISEEKESTFEMKESSGL 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0504 368 FunFam PTI1-like tyrosine-protein kinase At3g15890 14 117 - -
Lele37g0504 368 SMART serkin_6 42 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g0504 368 PIRSF ILK 10 325 - -
Lele37g0504 368 Pfam Protein kinase domain 43 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g0504 368 Coils Coil 307 327 - -
Lele37g0504 368 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 8 352 - -
Lele37g0504 368 SUPERFAMILY Protein kinase-like (PK-like) 23 313 IPR011009 -
Lele37g0504 368 FunFam PTI1-like tyrosine-protein kinase At3g15890 118 329 - -
Lele37g0504 368 CDD STKc_IRAK 48 315 - -
Lele37g0504 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Lele37g0504 368 MobiDBLite consensus disorder prediction 340 368 - -
Lele37g0504 368 ProSiteProfiles Protein kinase domain profile. 42 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g0504 368 Gene3D Phosphorylase Kinase; domain 1 12 117 - -
Lele37g0504 368 ProSitePatterns Protein kinases ATP-binding region signature. 48 70 IPR017441 GO:0005524
Lele37g0504 368 MobiDBLite consensus disorder prediction 349 368 - -
Lele37g0504 368 Gene3D Transferase(Phosphotransferase) domain 1 118 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0504 Lele-ChrLele37 4111225 4113915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0504 30 316 Trihelix Transcription Factor Family AT1G70460 51.203 5.31e-94 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Lele37g0504 Pkinase 5.4e-45 CL0016