Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0476 ATGTGTGATTTGAGTGATCACGGCCATATTAAGAGGCCTCACAGAGCGAACCAACCTGCTTGGCAAGCAATAAAGCAGCTCTGCTCTGAGCACGGTGGAGTTAGACTCGACCACTTCCACCTCCTTCTCCAGCTTGGCTCCGGCGATGTTGGCAACGTGTTCCTCTGCGAGATCAAGCACACAATGATGAAGAACGGTGGTGGTGGTGGTGGTGGTTACTTTGCATTGAAAGTTGTTGATAGAGAGTGTCTGAGAAAGAAAAATAAGCTCAAGAGAGCTGAGGCTGAGAGACAAGTTTTGGGTGTTCTTGATCACCCTTTTCTTCCAACCCTATACGCTAACTTCGATGCTTATCACTACTCTTGTTTGCTCATCGATTACTGCCATGGCGGTGACTTGTTCCAGCTTCAACAAAACCAGCCAACTCTTCGTTTTAGCGTCTCAACTGCTAAATTCTATGCAGCTGAGGTGCTTGTAGCTCTAGAATATCTGCACATGATGGGGATAATTTACAGAGACCTGAAGCCAGAGAACGTTCTTATTCAAGAAGATGGCCACGTCATGCTCTCCGACTTCGATCTCTCACTACTTCACTGTGAGGCTCATCCCAAGCTTCTGAAACAATACCTTACTGCAACAAGAACGAAGAAGAAGAAGCATGCAACTTTCTGTTGTACTGAAAACTCAGTGGAGGATGGGGCCATAATCAGAAGGAGGAGGAAGAAGAAAGCATCCTTCATAGCTGATGATGACGTGGAGTTATCAGTAGAACCAATGAACGCAAGATCCAACTCATTCGTTGGGACCCACGAGTATTTAGCACCAGAGATGATATTAGGGTTAGGACACGGGAGTGGAGTGGATTGGTGGGCGTACGGGGTGTTTGTGTACGAGCTGTTGTATGGGGTCACACCTTTCAAAGACAAAGACAAGGAGAAGACAATGAGGAACATTATAGGGAAGTCGTCGGTGAGGTTTCCGACAAGTGAGTTCAGAGACAAAGAAGAAGACGATGATGAGGAAGAAGAGATAGCGAAGGCACAAGATCTCATAAAACAGCTTCTGGTGAAGAATCCTAAGAAGAGACTAGGATCTACGAGAGGGTCTTGTGAGATTAAGAGACATGAATTCTTCGAAGGCACGAACTGGGCCTTAATTAGATCGAAGAAACCACCTCTTGTCCCTAAACAAGAAGTAGCAGTATTAGCAGAGAACTTGGTCAAGGCGAAAGCTACCGTCAATATCTCTCAGAAGATTGATTTCTTCTGA 1269 0.4571 MCDLSDHGHIKRPHRANQPAWQAIKQLCSEHGGVRLDHFHLLLQLGSGDVGNVFLCEIKHTMMKNGGGGGGGYFALKVVDRECLRKKNKLKRAEAERQVLGVLDHPFLPTLYANFDAYHYSCLLIDYCHGGDLFQLQQNQPTLRFSVSTAKFYAAEVLVALEYLHMMGIIYRDLKPENVLIQEDGHVMLSDFDLSLLHCEAHPKLLKQYLTATRTKKKKHATFCCTENSVEDGAIIRRRRKKKASFIADDDVELSVEPMNARSNSFVGTHEYLAPEMILGLGHGSGVDWWAYGVFVYELLYGVTPFKDKDKEKTMRNIIGKSSVRFPTSEFRDKEEDDDEEEEIAKAQDLIKQLLVKNPKKRLGSTRGSCEIKRHEFFEGTNWALIRSKKPPLVPKQEVAVLAENLVKAKATVNISQKIDFF 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0476 422 FunFam Serine/threonine-protein kinase OXI1 132 200 - -
Lele37g0476 422 SUPERFAMILY Protein kinase-like (PK-like) 21 400 IPR011009 -
Lele37g0476 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Lele37g0476 422 SMART serkin_6 39 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g0476 422 PANTHER FLIPPASE KINASE 1-RELATED 8 401 - -
Lele37g0476 422 Gene3D Transferase(Phosphotransferase) domain 1 128 200 - -
Lele37g0476 422 Coils Coil 76 96 - -
Lele37g0476 422 Gene3D Transferase(Phosphotransferase) domain 1 259 396 - -
Lele37g0476 422 Coils Coil 337 357 - -
Lele37g0476 422 Gene3D Phosphorylase Kinase; domain 1 37 127 - -
Lele37g0476 422 Pfam Protein kinase domain 263 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g0476 422 Pfam Protein kinase domain 40 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g0476 422 ProSiteProfiles Protein kinase domain profile. 39 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0476 Lele-ChrLele37 3929880 3931648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0476 4 400 AGC Kinase Gene Family AT2G26700 48.458 2.21e-139 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele37g0476 Pkinase 1.2e-30 CL0016