Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0448 ATGAGTAGCAATTCGTTGGCGGGCTTGCAAGATCACCTCAAATTGGCGAGGGAATACGCTCTTGAAGGCCTCTATGACACCTCCATCATCTTCTTCGACGGTGCAATTGCCCAGATCAACAAACACTTGAACACTGTGGACGACCCTTTACTGCGTACAAAATGGATGAATGTAAAGAAAGCTCTTTCTGAAGAAACGGAAGTAGTGAAGCAACTGGAGGCAGAGAGAAAAGCATTCAAAGAAACACCTAGTGGTAGTGGCAGACGTCCTTCTTCGCCCCCCATATCAGCTAAATCATCATCATCATTTGTGTTTCAACCATTAGATGAGTATCCTACTTCATCAAGTGCACCTTTGGATGATCCTGATGTATGGAGGCCACCTAATAGAGATGCCCCAAGTAGAAGACCCACAAGGTCTGGTCCAATGGCTGCTAGGAAGTCATCACAAGATGGGGCTTGGGCTCGAGGTGCTACTACAAGAACAAGTACAACTAGCCGTAGTACAAAAGCTGGTGGTTCAAGTAAGGTTAACTCAGGAGCCAGGGCGTCAACTTCTGCAAAGAAAGGCGCCGGTTCGGCTTCTGGAAAGTCGAGCAAGGGAGATTCAGTTAATGGAGATGCTGAAGATGGTAAGTCAAAGAAAGTACAATATGAGGGTCCTGATCCTGACTTGGCTGCAATGCTTGAAAGGGATGTATTAGAAAGCTCTCCTGGAGTGAGATGGGATGACGTGGCAGGGCTGACTGAAGCCAAAAGGCTTCTAGAAGAAGCTGTTGTGCTTCCCTTGTGGATGCCTGAATATTTCCAGGGGATTAGAAGACCATGGAAAGGTGTTCTCATGTTTGGTCCTCCAGGAACTGGGAAGACACTGTTAGCCAAAGCAGTTGCTACTGAATGTGGTACCACGTTCTTCAATGTTTCTTCTGCTACTTTAGCATCAAAGTGGCGTGGAGAGAGTGAGCGTATGGTGCGATGTTTGTTTGATCTTGCAAGAGCACATGCTCCAAGCACAATTTTCATTGATGAGATTGATTCCTTGTGTAATGCTAGGGGGGCATCTGGGGAACATGAATCATCGAGAAGGGTGAAATCAGAACTTCTAGTTCAGGTTGATGGTGTAAGCAATAGTTCCACGAATGAAGATGGTAGCAGGAAAATAGTAATGGTTTTAGCAGCCACCAACTTCCCTTGGGACATAGATGAGGCACTAAGGAGAAGGCTGGAAAAACGTATTTACATTCCTCTTCCTAATTTCGAGAGCCGTAAAGAGCTGATCCATATTAATTTGAAGACCGTAGAGGTGGCTCCTGATGTAAATATAGATGATGTGGCTCGCCGGACAGAGGGATATAGTGGGGATGATCTGACGAATGTCTGCCGCGATGCTTCCTTGAATGGTATGAGGCGTAAGATAGCGGGAAAGACGCGGGATGAGATAAAGAACATGCCCAAGGATGAGATTTCAAAGGACCCTGTTGCCATGTGCGATTTTGAAGAAGCTTTGGCGAAGGTCCAACGAAGTGTTTCACAGGCTGACATTGAGCGCCATGAGAAATGGTTTTCTGAATTTGGATCAGCATAA 1584 0.4609 MSSNSLAGLQDHLKLAREYALEGLYDTSIIFFDGAIAQINKHLNTVDDPLLRTKWMNVKKALSEETEVVKQLEAERKAFKETPSGSGRRPSSPPISAKSSSSFVFQPLDEYPTSSSAPLDDPDVWRPPNRDAPSRRPTRSGPMAARKSSQDGAWARGATTRTSTTSRSTKAGGSSKVNSGARASTSAKKGAGSASGKSSKGDSVNGDAEDGKSKKVQYEGPDPDLAAMLERDVLESSPGVRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAHAPSTIFIDEIDSLCNARGASGEHESSRRVKSELLVQVDGVSNSSTNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIHINLKTVEVAPDVNIDDVARRTEGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMPKDEISKDPVAMCDFEEALAKVQRSVSQADIERHEKWFSEFGSA 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0448 527 PANTHER AAA DOMAIN-CONTAINING 25 526 - -
Lele37g0448 527 Coils Coil 62 82 - -
Lele37g0448 527 MobiDBLite consensus disorder prediction 153 202 - -
Lele37g0448 527 Pfam ATPase family associated with various cellular activities (AAA) 279 416 IPR003959 GO:0005524|GO:0016887
Lele37g0448 527 FunFam Katanin p60 ATPase-containing subunit A1 237 405 - -
Lele37g0448 527 MobiDBLite consensus disorder prediction 85 113 - -
Lele37g0448 527 Hamap Meiotic spindle formation protein mei-1 [mei-1]. 7 527 IPR028596 GO:0008017|GO:0008568|GO:0051013
Lele37g0448 527 Pfam AAA+ lid domain 438 479 IPR041569 -
Lele37g0448 527 Gene3D - 417 503 - -
Lele37g0448 527 Gene3D - 3 80 - -
Lele37g0448 527 FunFam Katanin p60 ATPase-containing subunit A1 4 80 - -
Lele37g0448 527 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 230 513 IPR027417 -
Lele37g0448 527 MobiDBLite consensus disorder prediction 77 220 - -
Lele37g0448 527 ProSitePatterns AAA-protein family signature. 388 407 IPR003960 GO:0005524|GO:0016887
Lele37g0448 527 SMART AAA_5 275 418 IPR003593 -
Lele37g0448 527 FunFam Katanin p60 ATPase-containing subunit A1 417 503 - -
Lele37g0448 527 Gene3D - 237 518 IPR027417 -
Lele37g0448 527 MobiDBLite consensus disorder prediction 203 220 - -
Lele37g0448 527 CDD AAA 273 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0448 Lele-ChrLele37 3687381 3690606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0448 231 519 Calmodulin-binding Proteins AT3G56690 40.000 3.09e-50 184