Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0447 ATGTCGCCGGAGAGTACTGGCACCTCCCGCTGCTCCGCCCAGTCCGACGTCACCGTGTTGAACCTGGAGGAGACGGAGCTCACCCTCGGCCTTCCCGGCTCCAATAATATCACTAGCTCTAAACGTGCCTTCTCGGAAACCACCGTCTTTAGCCCAACGTCGTCGTCAAATATTACCCCAGCACCTAAGGCACAAGCGGTGGGGTGGCCGCCGGTGAGGGCGAGCAGGAAGAACATGATGAGGAGCTGCAAGTACGTGAAGGTGGCTGTGGACGGAGCTCCATATCTGAGGAAGGTAGATCTTGAGAAGTATGAGACTTATGATCAGCTGCTCACTGGTTTAGAGGCCATGTTTGGTTCCTTGACAATTCGCAATCATTTGAATGAGAGGAAAATGATGGACCTTGGGAATGGGGCGGAGTACGTGCCCACCTATGAGGACAAAGACGGTGACTGGATGCTCGTTGGAGATGTACCTTGGAAGATGTTTGTTGAATCCTGCAAAAGAATAAGGTTGATGATAAAGTCAGAGGCCAGTGGCTTAGAGATTGGAAGAACAGGGTTGAAGTTGGAGGAGAAAACGTGTGGGAATTAA 594 0.5168 MSPESTGTSRCSAQSDVTVLNLEETELTLGLPGSNNITSSKRAFSETTVFSPTSSSNITPAPKAQAVGWPPVRASRKNMMRSCKYVKVAVDGAPYLRKVDLEKYETYDQLLTGLEAMFGSLTIRNHLNERKMMDLGNGAEYVPTYEDKDGDWMLVGDVPWKMFVESCKRIRLMIKSEASGLEIGRTGLKLEEKTCGN 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0447 197 Pfam AUX/IAA family 81 181 IPR033389 -
Lele37g0447 197 ProSiteProfiles PB1 domain profile. 83 177 IPR000270 GO:0005515
Lele37g0447 197 Gene3D - 78 187 - -
Lele37g0447 197 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 21 180 IPR003311 GO:0005634|GO:0006355
Lele37g0447 197 FunFam Auxin-responsive protein 78 185 - -
Lele37g0447 197 SUPERFAMILY CAD & PB1 domains 75 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0447 Lele-ChrLele37 3672396 3673418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0447 87 184 B3 DNA Binding Superfamily AT4G23980 32.653 1.98e-09 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele37g0447 AUX_IAA 1.9e-49 CL0072