Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0446 ATGGCTCTCGGACTTGAAATCACAGAGCTCAGGTTGGGTCTTCCCGGCGGTGGGGATGATCAGAACAAGACTGGTGAGGTGAACAAGAAAAGGTTGTTCTCGGAGATTGGCCGTGTCGATGGCGTTGCCACCGGTGGTGGTGGTGAGGATGAGAATAGCTGCTCTGGCGACCGGAAAACACCGGAGAAGAGCGCGGTGGTGGGGTGGCCGCCAGTGGGGTCGTACCGGAGAAGAAACAGCATGAGTGATGGGTCGAAGGAGAAAATTTACGTGAAGGTTAGCATGGATGGAGCTCCTTTCCTGCGAAAAGTTGATTTAGGAATGCAAAAGGGCTACTCTGAGTTGGCTTCAGCCTTGGAGAAGCTCTTTGATTGCCACGGAATCGGAGAGGCATTGAAGGGTGTGGACAATTCTGAAGTCTTTCCCATTTATGAGGACAGAGATGGTGACTGGATGCTTGTTGGAGATGTACCTTGGGAAATGTTTATAGAGTCATGCAAGAGGCTGAGGATTATGAAGAGATCGGAGGCTAAAGGCTTTGATCTTCAGCCAAAAGGGTCTTTGAAGGGAAAAATGAAGTGA 582 0.5034 MALGLEITELRLGLPGGGDDQNKTGEVNKKRLFSEIGRVDGVATGGGGEDENSCSGDRKTPEKSAVVGWPPVGSYRRRNSMSDGSKEKIYVKVSMDGAPFLRKVDLGMQKGYSELASALEKLFDCHGIGEALKGVDNSEVFPIYEDRDGDWMLVGDVPWEMFIESCKRLRIMKRSEAKGFDLQPKGSLKGKMK 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0446 193 MobiDBLite consensus disorder prediction 40 71 - -
Lele37g0446 193 Pfam AUX/IAA family 53 180 IPR033389 -
Lele37g0446 193 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 4 178 IPR003311 GO:0005634|GO:0006355
Lele37g0446 193 ProSiteProfiles PB1 domain profile. 88 176 IPR000270 GO:0005515
Lele37g0446 193 SUPERFAMILY CAD & PB1 domains 78 173 - -
Lele37g0446 193 Gene3D - 82 185 - -
Lele37g0446 193 FunFam Auxin-responsive protein 83 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0446 Lele-ChrLele37 3663597 3666075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0446 70 178 B3 DNA Binding Superfamily AT4G23980 39.450 4.11e-14 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele37g0446 AUX_IAA 6e-45 CL0072