Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0442 ATGATGGATCTGATTTCAGGTTTACCAGATGATGTGGCTATGGACTGTTTGGTTCGTGTTTCCTATGATCGGTTCCCCACCGTTGCGTCGGTTTGTAAGAACTGGAAGAGGGAGATTGAGATGCCGGAGTTTCGCCGTCGACGGAGGGACACAAGTCATATGCAGAGACTCATCGTGATGGTTCAAGCGCGAGTCGATGAGGATAAACGCGTCAGTTCTTTGATGAAGGGTTCGGTCAGCACGATTTACCGTTTGAGTGTGTTCGACGCGAATTCGGGCCAGTGGAACGAGTTGCCGCCGCCTCCGGGTTTCTCTTGTGGGTTACCCATGTTCTGTCGAATAGCGGGTGTCGGATACGACTTGGTTTTGATTGGCGGGTGGGACCCGAACTCTTGGAAGTCTTCGAATTCCGTGTTTATTTACAACTTCATGTCGGCTAAATGGCGACGTGGGGCCGACATGCCGGGTGGGCCCAGGACTTTCTTCGCCTGCACGTCTGATTCCGAGCGAGTAGTCTACGTGGCCGGAGGGCATGACGATGAGAAGAATGCGTTGAGGTCGGCGTGGGCCTATGACGTGGCAAGAGATGAGTGGGTCGCACTTCCCGACATGGATAGAGAGAGGGACGAGTGCAAGGCCGTCTTGCACCGTCAAAGCGGGAAGATCCGGGTCATTGGAGGTTACTGTACGCAGATGCAAGGGCGGTTTGAGAGAAGCGCCGAAGCCTTTGATGTTGCCACGTGCAAGTGGGATCCGGTAGAAGAGGAGTTCCTGGGATCTGCCACGTGCCCGAGGACCTGCGTGGACGGTGTCGATGGAGGGAGAGTTTATATGTGCAGGGGCACTGACGTGGTTGTATTAGAGGGGAAAAAGTGGGAAGCTGTGGCGAAACTGCCATGTGAGATACGGGAAGTGGCGTACATGAGTTTGGGGATGGAGGGGACGTTGTTGGTAATTGGATCAAGTGGGTCTTCTGAACCGTACATGGGTTTTGTATTGGACCTTAAGAGTAACAGTTGGAGGAAGTTGGAAAGCCCAATGGGCCATACGGGCCACGTCCAGTCGGGTTGTCTGTTGGAGATTTAG 1086 0.5378 MMDLISGLPDDVAMDCLVRVSYDRFPTVASVCKNWKREIEMPEFRRRRRDTSHMQRLIVMVQARVDEDKRVSSLMKGSVSTIYRLSVFDANSGQWNELPPPPGFSCGLPMFCRIAGVGYDLVLIGGWDPNSWKSSNSVFIYNFMSAKWRRGADMPGGPRTFFACTSDSERVVYVAGGHDDEKNALRSAWAYDVARDEWVALPDMDRERDECKAVLHRQSGKIRVIGGYCTQMQGRFERSAEAFDVATCKWDPVEEEFLGSATCPRTCVDGVDGGRVYMCRGTDVVVLEGKKWEAVAKLPCEIREVAYMSLGMEGTLLVIGSSGSSEPYMGFVLDLKSNSWRKLESPMGHTGHVQSGCLLEI 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0442 361 Pfam Kelch motif 171 204 IPR006652 GO:0005515
Lele37g0442 361 Pfam Kelch motif 114 155 IPR006652 GO:0005515
Lele37g0442 361 PANTHER OS02G0208700 PROTEIN 2 361 IPR044595 GO:0080037|GO:2000762
Lele37g0442 361 SUPERFAMILY Kelch motif 82 347 IPR015915 GO:0005515
Lele37g0442 361 Gene3D - 43 358 IPR015915 GO:0005515
Lele37g0442 361 SMART kelc_smart 120 168 IPR006652 GO:0005515
Lele37g0442 361 SMART kelc_smart 171 218 IPR006652 GO:0005515
Lele37g0442 361 SUPERFAMILY F-box domain 2 68 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0442 Lele-ChrLele37 3617104 3618189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0442 8 201 Miscellaneous Gene Families AT4G33900 24.402 6.83e-06 45.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele44g0507 44 3894414 3896126 Lele37g0442 37 3617104 3618189 CCT
Lele41g0846 41 18175023 18179842 Lele37g0442 37 3617104 3618189 CCT
Lele42g0836 42 21269331 21273794 Lele37g0442 37 3617104 3618189 CCT
Lele37g0442 37 3617104 3618189 Lele41g0819 41 17900773 17911831 CCT
Lele37g0442 37 3617104 3618189 Lele42g0808 42 20997668 21001605 CCT
Lele37g0442 37 3617104 3618189 Lele43g0577 43 5187523 5191416 CCT
Lele37g0442 37 3617104 3618189 Lele44g0537 44 4185310 4190465 CCT
Lele37g0442 37 3617104 3618189 Lele37g0442 37 3617104 3618189 ECH
Lele37g0442 37 3617104 3618189 Lele39g0986 39 18689473 18690558 hybridization
Lele37g0442 37 3617104 3618189 Lele40g0387 40 3123743 3124501 hybridization