Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0431 ATGTCGAAGAAGCTTCAAACATTCGTTGACCAGAAAACGAAGGTTCGGAAATTCTTTCGCTATTGTCTCTCCAAGCTTAAAAACCCTCGTCCCCAAATCCACCCTTCGTCTTCTCTAACCCGGATCCTCTCGGGTTGCCAGCAACCCAAGACCCATTCGATAGCAATAGTCAGGGGAAACAACGCAGCTACGCTATCGGATATTGATCGCTTCCTCTTCGACAACTTCAAATCTCTGTTCCTGCACGAAGAAGATAATACTATGAACAGTAGCACTGTTAACAGAGTTTCTGAAGAAAATCAGGGAGAGCCGAGATCAGGATCCATTTCGTTTGACCGGACTTCGTTGGATATTCTCGGTAACCTCAGTGAGACTTCCGCTTCTCGTGAGAGCATCGTCATCTTGGCGTGCTCGACGACCCAGCATGAAGATCTTCGGCGATCTATGAAAGAAATGGTGGATCAGAGATTGAGAAATTATGGGAGGGTGGATTGGGGATTTATGGAAGAGCTCTTGTTTTGTTATTTGAACCTGAATGAGAGGAAGTCATACAGGTTCATACTGAGTGCTTACGTGGACTTGATCAACGGTCTGCGAGAAAGATCGCCAGAGAGAGCACCGGCGACATCGAAGCCAAGGAGTGTTCGCACATTTAGGACTGGGAGCGAGATCAGGAGGAAGGAGAAGATCGAGGAAGTGACGTTGCAATTCGTGGAATAA 720 0.4708 MSKKLQTFVDQKTKVRKFFRYCLSKLKNPRPQIHPSSSLTRILSGCQQPKTHSIAIVRGNNAATLSDIDRFLFDNFKSLFLHEEDNTMNSSTVNRVSEENQGEPRSGSISFDRTSLDILGNLSETSASRESIVILACSTTQHEDLRRSMKEMVDQRLRNYGRVDWGFMEELLFCYLNLNERKSYRFILSAYVDLINGLRERSPERAPATSKPRSVRTFRTGSEIRRKEKIEEVTLQFVE 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0431 239 Pfam Transcriptional repressor, ovate 142 197 IPR006458 -
Lele37g0431 239 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 55 198 IPR038933 GO:0045892
Lele37g0431 239 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 140 199 IPR006458 -
Lele37g0431 239 ProSiteProfiles OVATE domain profile. 134 197 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0431 Lele-ChrLele37 3528828 3529547 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele37g0431 Ovate 1.4e-16 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0431 37 3528828 3529547 Lele37g0431 37 3528828 3529547 ECH
Lele37g0431 37 3528828 3529547 Lele39g1000 39 18780309 18781031 hybridization
Lele37g0431 37 3528828 3529547 Lele40g0378 40 3069169 3069909 hybridization