Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0419 ATGGGTAACGAAGAAACTAGTCTTAAGATAATCAATAGGGAAACAGAAAAGAATATGCAATGGCAAGGAAATGGAGATTCAGTAGAGAGAGAGAAGACGAAGAAGAAGCTTGGGAGAGAGAGATGGCGCGCAAGAGACCTTGCAAGGGGCGGCTTTTGGAACGATGGAGGAAGGAAAATAAGAAGGAAGATGCGGAAAGATCTGAATGGTGTACTGAAATGGGGCCATATGTGATTCACATATGAAGAACAAGTTTATGCTGAGTTGAGTGTTCCTCAACATCTCATCTCAGAGCTGCTCACCTTCAAAGCTAAAATGGAGCCATCTTCCTTTATTGGAGTCACATGGGATGTTGTCAAGTGTTTCTGTGGCCGCATGGAAAGAGAAGCTGATTTCGTCTGCAGTTTGGAAACCAATCTGCAGTCGTTGGAAGGTAAAAGAGACGAGCTTGAAGACATTAAGAAAGACGTGGAAGCACGAATTGAGGAAGTTGAGAACAATCCAGACATAGAAATATCTCACCAACTCCGTGGTTGGCTGCAACGAGTTGAACGCACTCAACAGATTGGCTTCGTCATCGTAAGCATGCACTTCAAGCATGTATGCCCATATCATCTCTCTCGTAAGGTTCAAAGGTTGATGATGAGAGAGAATTTGAGGGAATTTGAAGCAGGAGGTGCAGGGGGTGTGACTGGAGTGATCTGTGGTTATCCACTAGACACCCTCCGAATCCACCAACAGAATTCAAATACGGCAACTTCTTCGTTGAGCTTAATAAAAAATGTGGTTTTCAAGGAAGGACCAGCTTCTCTTTACAGAGGCATGGCCGCACATTTGGCTGCCATTACTTTTCAGAATGCTATGATTTTTCAAACGTACGTAGCTCTCTCAAGAGCCTTTTACTCATCAGTAGCAAACAACCCTCCTTCCTACAACAGCGTTGCTCTAGCAGGATTCATAACTGGTGCTTTACAAAGCACGAGTGTGTCCCCAGTAGAACTGGTCAAAATTCGCCTCCAGCTGCAGAGCAAGGGCCAATTAACAAAAGAATCATATAAAGGTCCTTTATCAGTGACAAAGAAGATATGGAACAGAGAAGGTCTTAGAGGCATATTTCGAGGATTCAGCATCCCCATCCTCCGGGATGCTTCGGGCCATGGAGGATTAGCTGGGGTAATGAGTTGTATTGGCTCCTACCCTTTTGATGTTATGAAGACAAGACTACAGGCTCAAACACAATCATCACTGAGATACAGAGGCATTATTGATTGCCTGGGAAAGAGTGTCAGAGAAGAAGGACACAATGTTTTGTGGAGAGGTATAAATGGTGCTGTGTTTGCTGCTTATGAGATTTCTATGAGAAGCCCGTCAAACAATAACGGAAGTAGTAGTAGCACTAACAATCTAGGAGATTCATCCTTTTCTAGGAACACAAGACAATGA 1443 0.438 MGNEETSLKIINRETEKNMQWQGNGDSVEREKTKKKLGRERWRARDLARGGFWNDGGRKIRRKMRKDLNGVLKWGHMXFTYEEQVYAELSVPQHLISELLTFKAKMEPSSFIGVTWDVVKCFCGRMEREADFVCSLETNLQSLEGKRDELEDIKKDVEARIEEVENNPDIEISHQLRGWLQRVERTQQIGFVIVSMHFKHVCPYHLSRKVQRLMMRENLREFEAGGAGGVTGVICGYPLDTLRIHQQNSNTATSSLSLIKNVVFKEGPASLYRGMAAHLAAITFQNAMIFQTYVALSRAFYSSVANNPPSYNSVALAGFITGALQSTSVSPVELVKIRLQLQSKGQLTKESYKGPLSVTKKIWNREGLRGIFRGFSIPILRDASGHGGLAGVMSCIGSYPFDVMKTRLQAQTQSSLRYRGIIDCLGKSVREEGHNVLWRGINGAVFAAYEISMRSPSNNNGSSSSTNNLGDSSFSRNTRQ 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0419 480 Coils Coil 140 167 - -
Lele37g0419 480 SUPERFAMILY Mitochondrial carrier 218 442 IPR023395 -
Lele37g0419 480 Pfam Mitochondrial carrier protein 314 385 IPR018108 -
Lele37g0419 480 Pfam Mitochondrial carrier protein 387 446 IPR018108 -
Lele37g0419 480 Pfam Mitochondrial carrier protein 219 302 IPR018108 -
Lele37g0419 480 ProSiteProfiles Solute carrier (Solcar) repeat profile. 216 299 IPR018108 -
Lele37g0419 480 ProSiteProfiles Solute carrier (Solcar) repeat profile. 309 399 IPR018108 -
Lele37g0419 480 Gene3D Mitochondrial carrier domain 219 385 IPR023395 -
Lele37g0419 480 Gene3D Mitochondrial carrier domain 386 469 IPR023395 -
Lele37g0419 480 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 387 454 - -
Lele37g0419 480 MobiDBLite consensus disorder prediction 457 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0419 Lele-ChrLele37 3463329 3474305 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0419 236 462 Antiporters AT1G79900 46.296 1.26e-71 227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0419 37 3463329 3474305 Lele37g0419 37 3463329 3474305 ECH
Lele37g0419 37 3463329 3474305 Lele39g1015 39 18860814 18864776 hybridization
Lele37g0419 37 3463329 3474305 Lele40g0367 40 3001708 3003100 hybridization