Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele37g0414 | ATGAGAGAGACTTTGAGCGAATTTGTGGCAGGAGGTGTAGGGGGTGTGACTCGAGTGATCTGTGGTTATCCACTAGACACCCTCCGAGTCCCCCAACAGAATTCAAATACGGCAACTTCTGTGTTGAGCTTAATAAAAAATATGGTTTCCAAGGAAGGACTAGCTTCTCTTTACAGAGGCATGGCCGCACCTTTGGCTGCCATTACTTTTCAGGCAGCTCTCTCAAGAGCCTTTTACTCATCAGTAGCAAACAACCCTCCTTCCTACAACAGCGTTGCTCTAGCAGGATTCATAACTGGTGCTTTACAAAGCCCGATTGTGTCCCCAGTAGAACTGGTTAAAATTCGCCTCCAGCTTCAGAGCAAGGGCCAATTAACAACAGAATCCTATAAAGGTCCTTTATCAGTGACAAAGAAGATATGGAACAGAGAAGGTCTTAGAGGCATATTCCGAGGATTTGGCATCACCATCCTCCGGGATGCACCGGGACATGAGGCATTATTGATTGCCTGGGAGAGTGTCAGAGAAGAAGGACACGATGTTTTGTGGAGGGGTATAGGACCTACGGTGGGTAGAGCTTTTATAGTGAATGGTGCTGTGTTTGCTGCTTATGAGATTTCTATGAGAAGCCTGTCAAACAATAATGGAAGTAGTAGTAGCACTAACAATGTAGGAGATTCATCCTTTTCTAGGAACACACGACAATGA | 708 | 0.4548 | MRETLSEFVAGGVGGVTRVICGYPLDTLRVPQQNSNTATSVLSLIKNMVSKEGLASLYRGMAAPLAAITFQAALSRAFYSSVANNPPSYNSVALAGFITGALQSPIVSPVELVKIRLQLQSKGQLTTESYKGPLSVTKKIWNREGLRGIFRGFGITILRDAPGHEALLIAWESVREEGHDVLWRGIGPTVGRAFIVNGAVFAAYEISMRSLSNNNGSSSSTNNVGDSSFSRNTRQ | 235 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele37g0414 | 235 | PANTHER | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED | 172 | 211 | - | - | |
| Lele37g0414 | 235 | SUPERFAMILY | Mitochondrial carrier | 4 | 205 | IPR023395 | - | |
| Lele37g0414 | 235 | Gene3D | Mitochondrial carrier domain | 170 | 230 | IPR023395 | - | |
| Lele37g0414 | 235 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 87 | 177 | IPR018108 | - | |
| Lele37g0414 | 235 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 2 | 85 | IPR018108 | - | |
| Lele37g0414 | 235 | MobiDBLite | consensus disorder prediction | 214 | 235 | - | - | |
| Lele37g0414 | 235 | Pfam | Mitochondrial carrier protein | 4 | 82 | IPR018108 | - | |
| Lele37g0414 | 235 | Pfam | Mitochondrial carrier protein | 92 | 175 | IPR018108 | - | |
| Lele37g0414 | 235 | Pfam | Mitochondrial carrier protein | 172 | 214 | IPR018108 | - | |
| Lele37g0414 | 235 | Gene3D | Mitochondrial carrier domain | 1 | 169 | IPR023395 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele37g0414 | Lele-ChrLele37 | 3420672 | 3421923 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele37g0414 | 11 | 217 | Antiporters | AT1G79900 | 25.806 | 4.04e-12 | 62.8 |