Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0406 ATGTCTTCGCCGTCTCCGGAAACATCTCAGCCTGCCAACTCCACGTCTCCTCCTCCGCCGCCTCTTGTCACCACCAATGACACCTCTCCTCCAGCTCCGACTAATTCCTTGTCACCTACTGCCACTCCGGCCGCACCACCTCCTCCTCCGGCCGTGTTGCCGACGCCGATGGCAGATTCTAACGGAATGTCCAGGGCTACAGTAATTGGACTAGTTATCGGGACTGTATTTGGCTCGCTGCTTATGCTCGTTTGTGTGGGCGTTTGCGCTTTTTTCTATAAAAGGAGAAAGCGGAGGAGGATGAGAAAATATGGGTTGGACGATTACTCTGCTGCTCCTCCATCCCAACCCAAAGCTGATCAGTTTGGTGGTCCGCCCCAGCAATGGCAACATAGCAATCCTCCTCCAACCGATGGTGGAGCAACACTGCCTCCCAAGCCAAGTCCACCCCCCGGAGTTCTGTTGAATCAGCAAGCATCATCCCAGACTGTCGCATCTCCTCCTATGTGTTCTACAAGTGGCACAAGCTTGGAATCTGAGAAACCATACCATGCACCAACTCCTGCCATTACCTTGGGACTGTCACAAAGCGCATTTACATATGAAGAACTTGCATTTGCAACAAATGGATTCTCAGACTCAAATCTTCTTGGTCAAGGTGGGTTTGGCTATGTCCATAAAGGAGTCCTCCCAAATGGAAAAACTGTTGCAATTAAGCAGCTCAAATCTGGGAGCAGACAGGGGGAGCGTGAGTTCCAGGCTGAAGTGGAGGTCATTAGCCGAGTCCATCACAGACATCTTGTTTCCTTAGTTGGATACTGCACTGCTGGAGCACAGAGGTTGCTTGTATATGAATTTGTCCCAAACAATACACTAGAATTCCATTTACATGGAAAAGATAAAACAACAATGGACTGGACAACAAGGATAAAAATTGCTATTGGATCTGCAAAGGGATTGTCATATCTGCATGAGGACTGTCACCCGAGAATAATACATCGTGACATCAAGGCATCTAACATTCTTCTTGATGACAATTTTGAGGCCAAGGTTGCTGATTTTGGACTTGCCAAATTTTCATCAGACGCTGATACCCATGTCTCCACTCGAGTAATGGGAACCTTTGGATACCTTGCTCCAGAATATGCTGCTAGTGGGAAACTCACTGAGAAGTCAGACGTCTTCTCCTTTGGTGTTGTGCTTTTGGAGTTGATTACAGGGCGAAGACCTGTTGATAAAACTGAGTCTTTTACAGATGACAGTATGGTTGAGTGGGCAAGACCTTTACTTTCTCAAGCTATGGAAAATGGCAACTTTGACGCTCTTGCTGATCCAAGGTTGCAGAAGAGTTACAACTCTGATGAGATGCTTCGAATGGTTGCCTGTGCTGCAAATTGTGTGCGCCATTCAGCTAGGCATCGGCCTCGAATGAGCCAGGTAGTTCGGGCTCTGGAAGGCAATATTTCATTGGATGATCTGAATGAGGGGAGCACTCCTGGGCACAGCAGAACAGTTAGTTCCTTTGAAAGTTCAGGTTATGATACTGGCCAATACAATGAGGACCTAAAGAAGTTCAGGAAGCTGGCACTAGAGCAAGAAACTAGTGAATACAGTGGACCCAGTAGCGATTATGGTCAACATCAATCCGCCTCAAGCAGTTCAGGCCTGCAAACTACACGAGAAATATGTAGTTCGTTCTTCTCCTTCGACACAATTGAGCGGCGCAGAGCTCTTGGATCGGTCGCCGGTGATGTCTCTGTATCTAACAGTTGGGCGGTTTGCAGCGACTGTGATTGGTGCGGTGCCGATCTTGGGGCTGTTAGTTTACTTGTCTTTCTGTGTATGCAGAAAGAGGAGGTTGATCGTCGTTGGCCTCAGCACAATAATAGGCACGAGACTGGTCCTCCAAAGCCAATAAGAAGTCCAACAATAATACAATCTTCATCAGTAACCACCACAAGTTCCGCTGAATCGGGAAGACAACACCAGCTTGTGGTTGCACCATTAGGGTTACTGTCACCAAGAACTTTTACGTATGAAGAATTAGAATTGGCAACAGAGGGATTCTCAGACTCAAAATTTCTGGGCCAAGGTCAACCAAAAATCATACACCGTGACATCAAGGCAGCTAATATTCTTCTTGATAATGATTTTGAACCAAAGGTTGCAGATTTTGGGCACGCCAGATTCTCATTAGATACTGAAACCCATGTCTCAACTCGAATAATAGGAACCATTGGTTCTATCTTCCATCAAGATGTCTTCGCTAATTGGCACATCGAAAAGAATGCTCGAGATTGCTAA 2304 0.4674 MSSPSPETSQPANSTSPPPPPLVTTNDTSPPAPTNSLSPTATPAAPPPPPAVLPTPMADSNGMSRATVIGLVIGTVFGSLLMLVCVGVCAFFYKRRKRRRMRKYGLDDYSAAPPSQPKADQFGGPPQQWQHSNPPPTDGGATLPPKPSPPPGVLLNQQASSQTVASPPMCSTSGTSLESEKPYHAPTPAITLGLSQSAFTYEELAFATNGFSDSNLLGQGGFGYVHKGVLPNGKTVAIKQLKSGSRQGEREFQAEVEVISRVHHRHLVSLVGYCTAGAQRLLVYEFVPNNTLEFHLHGKDKTTMDWTTRIKIAIGSAKGLSYLHEDCHPRIIHRDIKASNILLDDNFEAKVADFGLAKFSSDADTHVSTRVMGTFGYLAPEYAASGKLTEKSDVFSFGVVLLELITGRRPVDKTESFTDDSMVEWARPLLSQAMENGNFDALADPRLQKSYNSDEMLRMVACAANCVRHSARHRPRMSQVVRALEGNISLDDLNEGSTPGHSRTVSSFESSGYDTGQYNEDLKKFRKLALEQETSEYSGPSSDYGQHQSASSSSGLQTTREICSSFFSFDTIERRRALGSVAGDVSVSNSWAVCSDCDWCGADLGAVSLLVFLCMQKEEVDRRWPQHNNRHETGPPKPIRSPTIIQSSSVTTTSSAESGRQHQLVVAPLGLLSPRTFTYEELELATEGFSDSKFLGQGQPKIIHRDIKAANILLDNDFEPKVADFGHARFSLDTETHVSTRIIGTIGSIFHQDVFANWHIEKNARDC 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0406 767 Pfam Protein tyrosine and serine/threonine kinase 215 484 IPR001245 GO:0004672|GO:0006468
Lele37g0406 767 MobiDBLite consensus disorder prediction 11 27 - -
Lele37g0406 767 MobiDBLite consensus disorder prediction 36 55 - -
Lele37g0406 767 ProSiteProfiles Protein kinase domain profile. 211 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g0406 767 MobiDBLite consensus disorder prediction 1 58 - -
Lele37g0406 767 SUPERFAMILY Protein kinase-like (PK-like) 189 484 IPR011009 -
Lele37g0406 767 Gene3D Phosphorylase Kinase; domain 1 173 286 - -
Lele37g0406 767 FunFam Proline-rich receptor-like protein kinase PERK1 287 495 - -
Lele37g0406 767 MobiDBLite consensus disorder prediction 491 513 - -
Lele37g0406 767 SUPERFAMILY Protein kinase-like (PK-like) 699 747 IPR011009 -
Lele37g0406 767 MobiDBLite consensus disorder prediction 107 184 - -
Lele37g0406 767 SMART serkin_6 211 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g0406 767 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 699 747 - -
Lele37g0406 767 MobiDBLite consensus disorder prediction 121 137 - -
Lele37g0406 767 MobiDBLite consensus disorder prediction 625 657 - -
Lele37g0406 767 Pfam Protein kinase domain 701 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g0406 767 MobiDBLite consensus disorder prediction 536 556 - -
Lele37g0406 767 Gene3D Transferase(Phosphotransferase) domain 1 682 750 - -
Lele37g0406 767 MobiDBLite consensus disorder prediction 640 657 - -
Lele37g0406 767 ProSitePatterns Serine/Threonine protein kinases active-site signature. 331 343 IPR008271 GO:0004672|GO:0006468
Lele37g0406 767 MobiDBLite consensus disorder prediction 153 180 - -
Lele37g0406 767 FunFam proline-rich receptor-like protein kinase PERK1 189 286 - -
Lele37g0406 767 ProSitePatterns Serine/Threonine protein kinases active-site signature. 702 714 IPR008271 GO:0004672|GO:0006468
Lele37g0406 767 Gene3D Transferase(Phosphotransferase) domain 1 287 496 - -
Lele37g0406 767 MobiDBLite consensus disorder prediction 138 152 - -
Lele37g0406 767 ProSitePatterns Protein kinases ATP-binding region signature. 217 239 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0406 Lele-ChrLele37 3374665 3383157 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0406 699 749 Trihelix Transcription Factor Family AT1G70460 64.706 1.10e-14 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lele37g0406 PK_Tyr_Ser-Thr 9.7e-49 CL0016