LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele37g0405	ATGTCTTCTTCCTCTCCCATTTCACCTCGAGACTCCCCTCTATACCACCGCCTCCTCTCCTACAGTGTAATTGATTACTACTCTACAGAGTTGCCTCCGTCTCCCTCGCCGTCTCCCTTGCCGTCTGGTGGTCAGGACAGATCACCCACAGGCAATCTATTACTGGGGGCTTTGCTTAGTTCATTGATGACGTTGACGCTGATAAGTTTGGTAGTTGGTGTCATATATATATGGAGAAAGAGGAGGCACTCACCACAACCACCAAACCAGCCAGAGGGTACACTTGCACTTCTACCATCTTCCAATATTGCCTCAGGACTCTCACCAACGAACACATTTACATATGAAGAATTAGAATTGGCAACAGAAGGATTCTCAGAGTCAAATTTTCTGGGCCAAGGTGGATTTGGTACTGTTCATAAAGGATTCCTCCCAAATAAACAAGCTGTGGCCATTAAGAAGCAGAAATCTGGAAGCAAACAGGGGATGCAAGAGTTTCAGATTGAAGTACAGGTAATTAGTAGAGTCCATCACAGACATCTTGTTTCCCTTGTTGGATACTGTATTGCTACAGCTCAGATGACGTTGATGCTTGTTTATGAGTTTCTCCCTAACAAAACCTTAGACTTCCATCTCCATGGAAAAGGCACAGAAACTCTAGACTGGTCAACAAGGATGAAGATTGCCATTGGCTCTGCAAAAGGATTGGCATATCTGCACGAAGACTGTGAACCCAAAATCATACATCGTGACATCAAGGCAGCTAACATTCTTCTTGATAACAAATTTGAGCCAAAGATTGCAGATTTTGGACTGGCCAAACTTTCATCAGACACTGATACCCATGTCTCCACGGCTAAAATAAAGGGAACCTTTGGATACTTGGCTCCAGAATATGCAAATAGCGGGAGACTCTCAGAGAAGTCAGATGTCTTCTCCTTTGGTGTTGTGCTCTTGGAGTTGATCACAGGACGAAAACCTGTTCTTCAAACTGGCTCTTTCCAAGATGACAGTCTGGTTCAGTGGGCAAGACCTCTACTCTCCATAGCTTTGGGAAATCGAAATTTTGAGGTTCTTGTTGATGCAAGGTTGCAGAATAATTACAACTCCGAAGAGATGTTTCGAATGGCCTCTTGTGCTGCAAACTGTGTCCGCCATTCAGCCCACCATCGTCCTCGAATGAGCCAGGTAGGGGATGCCTTGGCAGGAAAGATTTGTCTGGATAATAATTGGAACGAGGAGAGCACACAAGTCGACGACCAATGCCTGAACAGGTTTTGGAGGGGGGCCATAGGCGAAGGCCATAGCACTGGGGAATACGATGAGCCTATCAGTTCAAGCCAAGAAAATACAACTGATGCCTCTCACTCAGTTTCTGTTTAA	1383	0.4526	MSSSSPISPRDSPLYHRLLSYSVIDYYSTELPPSPSPSPLPSGGQDRSPTGNLLLGALLSSLMTLTLISLVVGVIYIWRKRRHSPQPPNQPEGTLALLPSSNIASGLSPTNTFTYEELELATEGFSESNFLGQGGFGTVHKGFLPNKQAVAIKKQKSGSKQGMQEFQIEVQVISRVHHRHLVSLVGYCIATAQMTLMLVYEFLPNKTLDFHLHGKGTETLDWSTRMKIAIGSAKGLAYLHEDCEPKIIHRDIKAANILLDNKFEPKIADFGLAKLSSDTDTHVSTAKIKGTFGYLAPEYANSGRLSEKSDVFSFGVVLLELITGRKPVLQTGSFQDDSLVQWARPLLSIALGNRNFEVLVDARLQNNYNSEEMFRMASCAANCVRHSAHHRPRMSQVGDALAGKICLDNNWNEESTQVDDQCLNRFWRGAIGEGHSTGEYDEPISSSQENTTDASHSVSV	460

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele37g0405	460	ProSitePatterns	Protein kinases ATP-binding region signature.	131	154	IPR017441	GO:0005524
	Lele37g0405	460	FunFam	proline-rich receptor-like protein kinase PERK8	203	416	-	-
	Lele37g0405	460	PANTHER	PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4	67	421	-	-
	Lele37g0405	460	Pfam	Protein tyrosine and serine/threonine kinase	129	399	IPR001245	GO:0004672\|GO:0006468
	Lele37g0405	460	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	101	202	-	-
	Lele37g0405	460	Gene3D	Phosphorylase Kinase; domain 1	100	202	-	-
	Lele37g0405	460	Gene3D	Transferase(Phosphotransferase) domain 1	203	423	-	-
	Lele37g0405	460	SUPERFAMILY	Protein kinase-like (PK-like)	103	399	IPR011009	-
	Lele37g0405	460	MobiDBLite	consensus disorder prediction	440	460	-	-
	Lele37g0405	460	MobiDBLite	consensus disorder prediction	437	460	-	-
	Lele37g0405	460	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	247	259	IPR008271	GO:0004672\|GO:0006468
	Lele37g0405	460	ProSiteProfiles	Protein kinase domain profile.	125	407	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele37g0405	460	SMART	serkin_6	125	374	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele37g0405	Lele-ChrLele37	3367654	3372844	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele37g0405	113	455	Trihelix Transcription Factor Family	AT1G70460	56.620	1.78e-127	384

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_PERK-1	Lele37g0405		PK_Tyr_Ser-Thr	1.7e-47	CL0016