Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0396 ATGGGCGTGGACATGTCCAATAACCCCCCTCCATCTTCTCACACTAAAGACTTCTTCGCTTCTCCAGCTCTTTCTCTCAGCCTCGCTGGGATTTTCCGTCATGCCGGGGAAGCAGCTGTGGCTGCGGGGGGCGCCACGTCCAGCAGGGAGGTTGAGGAAGGGGATGAAGGGAGCGGCGGCGGTGGCCGGCGAGACGAAACAGTGGATATTAGTAGCGAGAACTCAGGCCACACAAGATCCAGATCGGAGGATATTGATTTTGAAGGAGAAGGAGAGCATGACGATGACGGTGGCGACGGTGACGGAGATAAGAACAAGAAGAAGAAAAGGAAGAAGTATCACAGGCACACAGCTGAACAAATCAGAGAAATGGAAGCGCTTTTCAAAGAGTCACCACATCCTGATGAAAAGCAAAGGCAACAACTTAGCAAGCAATTAGGCCTTGCTCCTAGGCAAGTCAAGTTCTGGTTCCAGAATCGTCGAACCCAAATCAAGGCAATACAAGAGCGTCATGAGAATTCATTGTTGAAGACGGAAATCGAGAAACTGAGAGACGAAAACAAGCAGATGAGAGACACCATCAACAAAGCTTGCTGCCCCAACTGTGGCATCGCCCCCACCAGCAGAGACCCCGTCTTGTCCACCGAAGAACAACAACTTCGAATCGAAAATGCCAAACTCAAAGCCGAGGTAGAGAAGTTGAGAAGCGTAATAGGGAAGTACCCACAAGGGGCTGCGTCGCCGTCGTGTTCAGGAGGGAACGGCGAGCAAGAGAACAGGAGCTCGTTGGATTTCTACACTGGAATATTTGGGCTGGACAAGTCGAGAATAATGGAGATTGTGAATCAAGCTTTGGAGGAGCTCGTGAAAATGGCGACTGTGGGAGAACCATTGTGGGTTCGGAGTTTAGAGACTGATCGTGAAATACTCAACTATGATGAGTATGTGAGGGAGTTCGGAGCCAAATCTGAAAGTTCAACGCGCCATGGAAGACCAAAAAGATCCATCGAAGCTTCCAGAGAAACTGGGGTTGTTTTTGTTGATCTCCCTAGCCTCCTTCACAGATTCTTAGATGTGAATCAATGGAAGGAGATGTTTCCATGCTTGATATCAAAGGCAGCAACTGTAGATGTGATTTGCAGTGAAGAAGGAGCTAACAGGAATGGTGCGGTCAATCTGATGTTTGCTGAGCTACAAATGCTAACGCCAATGGTGGCCACAAGAGAAGTGTATTTCGTGAGGTACTGTAAGCAACTCAGTGCAGAGCAGTGGGCCATCGTGGACGTGTCAGTGGACAAGGTTGAAGACAACATCGACGCCTCTCTTGTGAAATGTCGAAAACGCCCCTCTGGTTGCATTATTGAAGATAAGTCTAATGGCCATTGCAAGGTGACGTGGGTGGAGCACTTGGAATGCCAGAAGAGCACAGTCCACACCTTGTACCGCACCATTGTAAACAGTGGCATAGCTTTTGGTGCAAGGCACTGGGTTGCCACCCTCCAACTTCAATGTGAACGTCTGGTTTTCTTCATGGCCACCAATGTTCCCATGAAGGATTCAACTGGTGTTGCAACGTTAGCAGGAAGGAAGAGCATTTTGAAGGTAGCGCAGAGAATGACATGTAATTTCTGCCATGCCATTGGAGCTTCGAGCTTCCATACGTGGACTAAGGTCACCAGCAAAACAGGGGAAGACATCAGAATAAGTTCTAGGAAGAATTTGAATGATCCTGGTGAACCTCTAGGGGTGATCTTGTGTGCAGTTTCTTCTGTGTGGCTCCCAGTTTCTCCTGATGTTCTGCTCGATTTCTTGAGGGATGAAGCTCGCAGATCTGAGTGGGATATCATGTCCAATGGTGCTTCAGTGCAATCCATAGCAAACTTAGCCAAAGGACAAGATCGAGGCAATTCAGTGACCATCCAAACAATTAAATCAAAGGAGAACAGCATGTGGGTACTACAGGATAGCTGCACAAATGCATATGAATCAATGGTGGTGTATGCTCCAGTTGATATAACTGGGATTCAGTCTGTGATGACAGGATGTGACTCTAGCAATCTAGCCATACTTCCCTCAGGCTTCTCAATTCTACCTGATGGGTTGGAAGCAAGGCCATTGGTCATAACTTCAAGGAAAGAAGAGAGAAACACAGAAGGAGGGTCTTTGCTCACAGTGGCTCTTCAGGCCCTTACTAATACATCTCCTACAGCTAAGCTAACAATGGAGTCTGTGGAATCTGTTAACACTCTCATATCTTGTACATTAAGAAATATCAGAACCAGTTTACAATGTGAGGATGGTTGA 2304 0.4757 MGVDMSNNPPPSSHTKDFFASPALSLSLAGIFRHAGEAAVAAGGATSSREVEEGDEGSGGGGRRDETVDISSENSGHTRSRSEDIDFEGEGEHDDDGGDGDGDKNKKKKRKKYHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKTEIEKLRDENKQMRDTINKACCPNCGIAPTSRDPVLSTEEQQLRIENAKLKAEVEKLRSVIGKYPQGAASPSCSGGNGEQENRSSLDFYTGIFGLDKSRIMEIVNQALEELVKMATVGEPLWVRSLETDREILNYDEYVREFGAKSESSTRHGRPKRSIEASRETGVVFVDLPSLLHRFLDVNQWKEMFPCLISKAATVDVICSEEGANRNGAVNLMFAELQMLTPMVATREVYFVRYCKQLSAEQWAIVDVSVDKVEDNIDASLVKCRKRPSGCIIEDKSNGHCKVTWVEHLECQKSTVHTLYRTIVNSGIAFGARHWVATLQLQCERLVFFMATNVPMKDSTGVATLAGRKSILKVAQRMTCNFCHAIGASSFHTWTKVTSKTGEDIRISSRKNLNDPGEPLGVILCAVSSVWLPVSPDVLLDFLRDEARRSEWDIMSNGASVQSIANLAKGQDRGNSVTIQTIKSKENSMWVLQDSCTNAYESMVVYAPVDITGIQSVMTGCDSSNLAILPSGFSILPDGLEARPLVITSRKEERNTEGGSLLTVALQALTNTSPTAKLTMESVESVNTLISCTLRNIRTSLQCEDG 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0396 767 Coils Coil 166 193 - -
Lele37g0396 767 CDD START_ArGLABRA2_like 274 505 - -
Lele37g0396 767 Pfam Homeodomain 110 165 IPR001356 GO:0003677
Lele37g0396 767 Gene3D - 280 502 IPR023393 -
Lele37g0396 767 ProSiteProfiles 'Homeobox' domain profile. 107 167 IPR001356 GO:0003677
Lele37g0396 767 Gene3D - 98 179 - -
Lele37g0396 767 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 108 762 IPR042160 -
Lele37g0396 767 SUPERFAMILY Bet v1-like 272 506 - -
Lele37g0396 767 FunFam Homeobox-leucine zipper protein HDG1 96 183 - -
Lele37g0396 767 MobiDBLite consensus disorder prediction 38 119 - -
Lele37g0396 767 FunFam Homeobox-leucine zipper protein GLABRA 2 279 505 - -
Lele37g0396 767 ProSitePatterns 'Homeobox' domain signature. 142 165 IPR017970 GO:0000981|GO:0006355
Lele37g0396 767 ProSiteProfiles START domain profile. 270 509 IPR002913 GO:0008289
Lele37g0396 767 MobiDBLite consensus disorder prediction 49 87 - -
Lele37g0396 767 CDD homeodomain 114 165 IPR001356 GO:0003677
Lele37g0396 767 Coils Coil 217 237 - -
Lele37g0396 767 Pfam START domain 280 506 IPR002913 GO:0008289
Lele37g0396 767 SMART START_1 279 506 IPR002913 GO:0008289
Lele37g0396 767 SMART HOX_1 109 171 IPR001356 GO:0003677
Lele37g0396 767 SUPERFAMILY Bet v1-like 537 752 - -
Lele37g0396 767 SUPERFAMILY Homeodomain-like 100 168 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0396 Lele-ChrLele37 3317692 3325447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0396 70 766 Homeobox Transcription Factor Family AT1G79840 66.195 0.0 934
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele37g0396 START 3.3e-55 CL0209