Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0391 ATGACATCTCCGAAGTCCGTATCTCAACTGCCTTTGGTGATGGGGAGTGAGGTGGATGCAGTGAAGGAGGCCCAAATAGTGGATGCCCGTGCAAGAAACATCAGTCACAATGTGAGGTGCACAGAATGTGGGAGTCAATCCATTGAAGATTCTCAAGCAGACATTGCGATTCTACTTAGAAAGTTAATTCGTGATGAGATTCGCAGTGGGAAGACAGACAAGGAGATATACAACAAGCTTGAGGATGAATATGGAGAGTATGCACCAAAGTTTGATTTGCAGACTGCAGCTTTATGGCTATGCCCACTTCTAGTTGCAGGTGCAGCAGCTGGAGTATGGGCTTACAACAGGCATAAGAAGAAGACTAATGTTCATATCATGGCTTTGAACCTTATCAGAGGTGTTCCATTGACCCCAAAAGAAAGGCAAACCATGCTTGATCTCCTTACACCACCTCCATCACAGAATCCAAGAACTCCCTTCTGGTGGAGGAGATGGCGAGCGTCACCTTCTGAATTCATGGAGGTGGTCACAGAATTTGCTAAACATGGGCCTGCAGCTTATGACAGTGTTGCCATTAGAGCAGATCAAAAGAGTTACAGTTACAAGCAGCTCATATCTTCTGCACAGGAGATATCAAATCTCTTATGTGGAAATGACATGAATTCAGGAAATGTTGGTGGAGCTCGAATAGGAATTGTAGCCAAACCCTCTGCTGAGTTTGTTGAAGCAATGCTAGGGACTTGGCTTAGTGGAGGTGTTGCCGTGCCACTTGCACTGAGCTATCCAGAAACAGAGCTATTGTATGTGATGAATAATGCTGATGTGTCTGCCATATTGAGTACTGAAGATCATAGTCAAACAATGCAAAATGTTGCCAATAAAAGCTCTTCTCAGTTCTTTCTTATTCCTCCTGTTCCCAATAAATCCTCGGCGAAGAGCAGAGATGAAGATTCACAAAATAAAGAAATGATGGAAGAAAGAATTCATCAGGGGAATATCAAAAGAACAAATGAGGAGAGTGGAAGTAATGTAAATAAAGTGGGCGAGCTTTGCATTAAAAGCCCATCGTTGTTTAAAGAATATTGGAAACTTCCTGAGGTAACGAAGGAATCATTCATTGATGATGGCTTCTTCAAAACTGGAGATGCAGTTACGATAGATGAAGATGGATATTACATCATTTTAGGACTTTATACTGTTGTTTTGTGCAAAATTCACTGGTCTGTCTGTTTGATTGAGACCAGAGGTGTGGCCTGCATTATGAACCCAGCTGTGTCAGAGTGTTGCGTGTTGGGCTTACCAGACAAAGATTATGGAGAAGTAGTTTGTGCAATTATTGTGGCAGAGGCTGAGACTAAGAAAAAGAGAGAGGAAGAGTCAAAACCTGCTATAACCTTAGAAGAATTGTCTTCTCGGGCCAAAGACAGGCTTGCACCTTACAAGATACTCACTCGATTGTTCCTTTGGGACTCTCTTCCTCGTAATGCAATGGGGAAGAGATCGATGGAAGATTCAAAAGCTCTGGAAAGAATGGAGAAACGGATAATCAGCTTCTCGAATGGAGCCGTAGGTCACGAGGCGGAGGCCGCAGCTGCAAGGGGCCTCAGAGTGGTGAAGCTTCACAAAGGTTTTCTTCTCTGCGATTTCATCGTTCACGATGGCGTCACAGAAGCGGTGGAGGTAGAAGGGAAGGCGATGGGGGAGAAGGGAAAGATGACGTCGGTGAGGGTGGAGGTGAGGAATAAACACGATGGACAAATGGTTGCCTTAGGCATCATGTGGATGTCATCTTCTCGTCCAAAAGACAAACTACGCGCTTCCAAACTGTAA 1833 0.4424 MTSPKSVSQLPLVMGSEVDAVKEAQIVDARARNISHNVRCTECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKEIYNKLEDEYGEYAPKFDLQTAALWLCPLLVAGAAAGVWAYNRHKKKTNVHIMALNLIRGVPLTPKERQTMLDLLTPPPSQNPRTPFWWRRWRASPSEFMEVVTEFAKHGPAAYDSVAIRADQKSYSYKQLISSAQEISNLLCGNDMNSGNVGGARIGIVAKPSAEFVEAMLGTWLSGGVAVPLALSYPETELLYVMNNADVSAILSTEDHSQTMQNVANKSSSQFFLIPPVPNKSSAKSRDEDSQNKEMMEERIHQGNIKRTNEESGSNVNKVGELCIKSPSLFKEYWKLPEVTKESFIDDGFFKTGDAVTIDEDGYYIILGLYTVVLCKIHWSVCLIETRGVACIMNPAVSECCVLGLPDKDYGEVVCAIIVAEAETKKKREEESKPAITLEELSSRAKDRLAPYKILTRLFLWDSLPRNAMGKRSMEDSKALERMEKRIISFSNGAVGHEAEAAAARGLRVVKLHKGFLLCDFIVHDGVTEAVEVEGKAMGEKGKMTSVRVEVRNKHDGQMVALGIMWMSSSRPKDKLRASKL 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0391 610 Pfam Cytochrome C biogenesis protein 27 147 IPR005616 -
Lele37g0391 610 SUPERFAMILY Acetyl-CoA synthetase-like 166 292 - -
Lele37g0391 610 Gene3D - 413 518 IPR045851 -
Lele37g0391 610 Gene3D Cytochrome C biogenesis protein 16 91 IPR038297 -
Lele37g0391 610 PANTHER - 14 167 - -
Lele37g0391 610 Gene3D - 338 397 IPR042099 -
Lele37g0391 610 Gene3D - 164 337 IPR042099 -
Lele37g0391 610 Pfam AMP-binding enzyme 339 397 IPR000873 -
Lele37g0391 610 Pfam AMP-binding enzyme 189 321 IPR000873 -
Lele37g0391 610 SUPERFAMILY Acetyl-CoA synthetase-like 346 500 - -
Lele37g0391 610 CDD CcmH_N 27 89 - -
Lele37g0391 610 Pfam AMP-binding enzyme C-terminal domain 422 500 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0391 Lele-ChrLele37 3254889 3265173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0391 345 505 Monolignol Biosynthesis Gene Families AT1G20500 29.193 1.21e-13 72.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0391 37 3254889 3265173 Lele37g0391 37 3254889 3265173 ECH
Lele37g0391 37 3254889 3265173 Lele40g0347 40 2857514 2868108 hybridization