Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0385 ATGGGTGGGAACCCTAATTCGTGGAGCAATATGCATGACGCTGCTTATGTTGTTGGATCTTCCATTCCTTTCAATTCGCTGATCCCTCAAAACCCAGATCAGCCTCCGGCTCCTTCAAGCTGGAGCCAGCTCCTCTTCTCAGGAGCACCTGGAGAAGAACAGAGAATGAGTTATGATCATTTTCAAGCAAAGAAGTTGGGAACTTGGGAAGAACAAGTTCTGAATAATCCATCCTTGTCCAGAGTTCATCTTGTTGAAGGATTAATAAAGCAAGAGGCCTGCTTGTACGGTCATGGTGAGGAATTTCAGGGTACTTCTTCATCAGCAGCTAATTGGTCACACATGGTGGTTCCTGCTGTTTCTTCTTCCCCTAGGTCGTCTAGCGTCTCTAGCTTCACTGGTAGTCATACTTATAACAACAACAACAACACTGTTATGGATTCTTTCTCTTATAACAAGGCCCACACTAAGAAAACTCGTCTTCCTGCTGCAGATCACTCATTTGAGTGTAGCACAGCCACTGGTGGAATGTGTAAGAAGGCTAGGGTTCAAGCATCTTCAAGCCAGCCTCCTCTCAAGGTGAGGAAGGAGAAATTAGGAGATAGAATATCAGCCCTTCACCAGCTAGTTTCTCCTTTTGGGAAGACTGACACAGCTTCAGTGTTGTTAGAAGGCATTGGATATATCAGATTCCTTCATGGTCAAATTGAGGCTCTCTGTTTTCCTTATTTCGGAAATTCATCAAAAAACTTGAGGAATCACCACTTTGTGAATCATGGGGAGAGGAATTCTGTATTCCCAGAGGACCCTGGACAGCTGTTGAATAATGACTCTTCCCTCAAAAGAAATGGAGCTCCAAACCAGGAAAATGGAGAAGAGAAAGCAAAGGACTTGAGGAGCAAGGGGTTATGCTTGGTGCCAGCAATGTCTCTGAGGCATCATTGGGGAAGTGATCATAATAATATTGGAGCTGATTTTTGGTCATCCACTTATGCCACCGGTTTTTAA 1008 0.4425 MGGNPNSWSNMHDAAYVVGSSIPFNSLIPQNPDQPPAPSSWSQLLFSGAPGEEQRMSYDHFQAKKLGTWEEQVLNNPSLSRVHLVEGLIKQEACLYGHGEEFQGTSSSAANWSHMVVPAVSSSPRSSSVSSFTGSHTYNNNNNTVMDSFSYNKAHTKKTRLPAADHSFECSTATGGMCKKARVQASSSQPPLKVRKEKLGDRISALHQLVSPFGKTDTASVLLEGIGYIRFLHGQIEALCFPYFGNSSKNLRNHHFVNHGERNSVFPEDPGQLLNNDSSLKRNGAPNQENGEEKAKDLRSKGLCLVPAMSLRHHWGSDHNNIGADFWSSTYATGF 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0385 335 MobiDBLite consensus disorder prediction 262 296 - -
Lele37g0385 335 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 193 243 IPR036638 GO:0046983
Lele37g0385 335 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 183 232 IPR011598 GO:0046983
Lele37g0385 335 MobiDBLite consensus disorder prediction 269 286 - -
Lele37g0385 335 CDD bHLH_AtbHLH_like 193 239 IPR045239 -
Lele37g0385 335 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 68 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0385 Lele-ChrLele37 3223929 3227100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0385 51 273 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 43.902 3.05e-38 137
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0385 37 3223929 3227100 Lele37g0385 37 3223929 3227100 ECH
Lele37g0385 37 3223929 3227100 Lele39g1043 39 19072886 19076026 hybridization