Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0383 ATGTCTAAACCATTAGAACATGATTACATAGGCTTAGCAGCGTCAGAGAATCCGTCCATGGAGAAACACTCTGAGAAAATATCTTCTCCTTCTTCTGCTGCTTCGTCTACTCTTTCTTCTGAGAAAGAAAAAGGCTCTTCTCTTAATTTCAAAGAGACAGAGCTCAGGCTTGGCCTTCCTGGTAGTGATTCTCCTCCTGAGAGGAAATCAGGAACTGGGATTTCTCTTTTCGGCAAGGATTTGCAGAGTAATCATAATAATACTGATACTAATGCTAATAATGGGTTCTGTTCTTCTTCTTCTTCTTCCCCTTCGAAGAACAACAACGTGGCTGGAGCTAAAAGGGGTTTTTCTGACGCCATTGATGGGATTGGGCCTTCTGGGAAATGGAGTTTCTCTGTGAGTGACAAAATTATTGGGTCTGAAGCTGATTTGGGAAAAGGAGCCTCTTTGTTGTCTCCCAGAGGAGGAGGGAATGTTGTCAAGCCTCCTCTCGTTGCTGCTGCTGAAGCTTCTGCAAATCCTGAACAAAAAAACATTAAAGATGGTGGAATTGTTCAAGAGAAGAAGAAACCTCAGGTTTCTGTTGCTGCTACAAATGAACATGGAAGTTCTCCTCCTGCTCCTAAGGCACAGGTTGTGGGATGGCCACCAATTCGATCATTTCGAAAGAACAGCATGGCCTCTAATTCGGCGAAGAACAATGATGAAGGCGATGCGAAATCTGGATATGGCTGTCTCTATGTGAAGGTCAGCATGGATGGTGCTCCTTATCTCAGAAAGGTTAATCTCAAAACCTTCACCAACTATCCGGAACTTTCTTCAGCTCTTGAGAAGATGTTCAGCTGCTTCACCATTGGTCAATGCAGTTCTGGAGGACTTGCTGTGAAAGGCGGCCTAAGCGAGAGCTCTTTGAGGGACCTTCTTCATGGTTCTGAATATGTTCTTACTTATGAAGATAGGGATGGTGATTGGATGCTTGTTGGTGATGTTCCCTGGGAGATGTTCACTGACTCATGTAGGAGATTAAGGATCATGAAAGGTTCCGAGGCAAACGGGCTCGCTCCAAGGGTGGTGGAAAAATCCAGGAGCCAAAACTAG 1101 0.4469 MSKPLEHDYIGLAASENPSMEKHSEKISSPSSAASSTLSSEKEKGSSLNFKETELRLGLPGSDSPPERKSGTGISLFGKDLQSNHNNTDTNANNGFCSSSSSSPSKNNNVAGAKRGFSDAIDGIGPSGKWSFSVSDKIIGSEADLGKGASLLSPRGGGNVVKPPLVAAAEASANPEQKNIKDGGIVQEKKKPQVSVAATNEHGSSPPAPKAQVVGWPPIRSFRKNSMASNSAKNNDEGDAKSGYGCLYVKVSMDGAPYLRKVNLKTFTNYPELSSALEKMFSCFTIGQCSSGGLAVKGGLSESSLRDLLHGSEYVLTYEDRDGDWMLVGDVPWEMFTDSCRRLRIMKGSEANGLAPRVVEKSRSQN 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0383 366 Gene3D - 241 360 - -
Lele37g0383 366 MobiDBLite consensus disorder prediction 24 44 - -
Lele37g0383 366 MobiDBLite consensus disorder prediction 170 215 - -
Lele37g0383 366 FunFam Auxin-responsive protein 241 358 - -
Lele37g0383 366 SUPERFAMILY CAD & PB1 domains 246 347 - -
Lele37g0383 366 MobiDBLite consensus disorder prediction 76 111 - -
Lele37g0383 366 Pfam AUX/IAA family 52 357 IPR033389 -
Lele37g0383 366 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 48 353 IPR003311 GO:0005634|GO:0006355
Lele37g0383 366 ProSiteProfiles PB1 domain profile. 246 348 IPR000270 GO:0005515
Lele37g0383 366 MobiDBLite consensus disorder prediction 1 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0383 Lele-ChrLele37 3198499 3200897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0383 250 356 B3 DNA Binding Superfamily AT4G23980 29.907 3.11e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele37g0383 AUX_IAA 1e-88 CL0072