Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0381 ATGGCCGGAATAGCATTCGGACGCTTCGATGATTCTTTCAGTCTTGGCTCCATTAAAGCCTACATCGCTGAGTTCATCTCAACCCTCCTCTTCGTTTTCGCCGGCGTTGGTTCCGCCATAGCCTATGTCTCCATTGGAGCTAACATATCAGGAGGCCATGTGAACCCAGCAGTGACCTTTGGTTTGGCTCTTGGAGGGCAGATCCCCATCCTCACTGGTATTTTCTACTGGATTGCTCAGCTTTTTGGAGCCATTGCAACTCCTACCCACAGTGTGGCTGCCGGAGTGGGAGCAATAGAAGGAGTGGTTATGGAGATTATTATTACTTTTGCTTTGGTCTACACTGTCTATGCCACAGCTGCTGACCCCAAGAAGGGTTCTCTTGGGACCATTGCTCCCATTGCCATTGGCTTTATTGTTGGAGCCAACATCTTGGCTGCCGGCCCCTTCTCCGGCGGCTCGATGAACCCGGCTCGCTCCTTTGGCCCCGCCGTGGTTTCTGGCGACTTCCATGACAACTGGATCTACTGGGTTGGACCCCTAATTGGTGGTGGCTTGGCTGGCCTTATCTATGGCAATGTCTTCATGCACTCTGAACATGCCCCTTTGGCTAATGAGTTTTGA 624 0.5192 MAGIAFGRFDDSFSLGSIKAYIAEFISTLLFVFAGVGSAIAYVSIGANISGGHVNPAVTFGLALGGQIPILTGIFYWIAQLFGAIATPTHSVAAGVGAIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFHDNWIYWVGPLIGGGLAGLIYGNVFMHSEHAPLANEF 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0381 207 Gene3D Glycerol uptake facilitator protein. 2 206 IPR023271 -
Lele37g0381 207 PRINTS Major intrinsic protein family signature 104 122 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele37g0381 207 PRINTS Major intrinsic protein family signature 137 159 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele37g0381 207 PRINTS Major intrinsic protein family signature 174 194 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele37g0381 207 PRINTS Major intrinsic protein family signature 35 59 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele37g0381 207 PRINTS Major intrinsic protein family signature 72 91 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele37g0381 207 Pfam Major intrinsic protein 42 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele37g0381 207 SUPERFAMILY Aquaporin-like 13 202 IPR023271 -
Lele37g0381 207 PANTHER AQUAPORIN-8 4 41 IPR034294 -
Lele37g0381 207 ProSitePatterns MIP family signature. 53 61 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0381 Lele-ChrLele37 3188466 3190078 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0381 1 205 Major Intrinsic Protein MIP AT3G16240 71.255 5.26e-114 323