Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0375 ATGACGATTCAAACCTCCACAGAAACTACCAGTTCCAGCTCTCCTTCCCCTTCCCCTTCTTCCTCGTCGTCTTCCTCGTCTGAAATATCGAACCCCACTTCCAATTCTCAGGCCCAGAAAACACAGTCTCTGAGCAAACAAGAACAGAGCACTTGCAGAGCCAAGAGAAGCAGAGACCCTTCTTCTGACAAGTACCCATCTTACCATGGAGTCCGAATGCGAAATTGGGGCAAATGGGTCTCTGAAATTAGGGAGCCTCGCAAGAAATCACGAATCTGGCTCGGCACTTTCGCCACACCAGAAATGGCGGCTCGAGCTCATGACGTCGCCGCTCTGAGCATCAAGGGTCAATCAGCCGTCCTCAACTTCCCTCACATAGCCTCTCTGCTTCCCAGACCCGTCACGCTTTCCCCACGTGACATCCAAGCTGCAGCCGCCGAAGCCGCCGCCATGGTGAATTTCGACCCTGCTCAGCAGCTTTCGTCTTCTTCTTCGCCGGAAGAAGCAGAGTCGTCGGAGCTGAGTGAGATAGTGGAATTGCCCAACATTGAAGAGAGCTTCGATTCGGTGGAGGAGTCTTCGACGGGTCACGACTTTGTGTGGGTGGAGTCGATGGATTGTTGGGTATATGATCCTCCATTAATGGGATTACAGAAAGAAGGCTTCTTTGACCAGTTTTACGGAGAAGAAGAAGAAGGCTTTGAGATATCAATTTGGGATTAA 723 0.5118 MTIQTSTETTSSSSPSPSPSSSSSSSSEISNPTSNSQAQKTQSLSKQEQSTCRAKRSRDPSSDKYPSYHGVRMRNWGKWVSEIREPRKKSRIWLGTFATPEMAARAHDVAALSIKGQSAVLNFPHIASLLPRPVTLSPRDIQAAAAEAAAMVNFDPAQQLSSSSSPEEAESSELSEIVELPNIEESFDSVEESSTGHDFVWVESMDCWVYDPPLMGLQKEGFFDQFYGEEEEGFEISIWD 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0375 240 ProSiteProfiles AP2/ERF domain profile. 67 124 IPR001471 GO:0003700|GO:0006355
Lele37g0375 240 Gene3D AP2/ERF domain 67 126 IPR036955 GO:0003700|GO:0006355
Lele37g0375 240 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 45 187 - -
Lele37g0375 240 SMART rav1_2 67 130 IPR001471 GO:0003700|GO:0006355
Lele37g0375 240 MobiDBLite consensus disorder prediction 1 50 - -
Lele37g0375 240 MobiDBLite consensus disorder prediction 1 69 - -
Lele37g0375 240 CDD AP2 66 125 IPR001471 GO:0003700|GO:0006355
Lele37g0375 240 FunFam Ethylene-responsive transcription factor 2 67 125 - -
Lele37g0375 240 MobiDBLite consensus disorder prediction 51 65 - -
Lele37g0375 240 Pfam AP2 domain 66 116 IPR001471 GO:0003700|GO:0006355
Lele37g0375 240 PRINTS Ethylene responsive element binding protein signature 68 79 IPR001471 GO:0003700|GO:0006355
Lele37g0375 240 PRINTS Ethylene responsive element binding protein signature 90 106 IPR001471 GO:0003700|GO:0006355
Lele37g0375 240 SUPERFAMILY DNA-binding domain 67 125 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0375 Lele-ChrLele37 3143433 3144155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0375 35 213 AP2-EREBP Transcription Factor Family AT5G11590 55.051 1.60e-61 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele37g0375 AP2 3.1e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0375 37 3143433 3144155 Lele37g0375 37 3143433 3144155 ECH
Lele37g0375 37 3143433 3144155 Lele39g1053 39 19152541 19153275 hybridization