Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0369 ATGTCCTGCAAGGATGGTAAAATAGCACTGGACAACGGCAAGTATGTCCGTTATACACCTGAGCAGGTTGAAGCCCTTGAGAGGCTTTACCACGAATGCCCCAAACCTAGTTCCATTCGTCGCCAGCAGCTTATCCGCGAGTGTCCTATTCTCTCCAACATTGAGCCGAAGCAAATTAAAGTTTGGTTCCAGAACAGAAGATGCAGAGAGAAGCAGAGAAAAGAGGCTTTTCGCCTTCAAGCAGTTAATAGGAAGCTGTCAGCTATGAACAAGCTCTTGATGGAGGAGAATGATAGGTTACAGAAGCAGGTGTCTCAATTGGTGTACGAAAATGGCTACTTTCGTCAACACACTCAAAATACAACAATTGCAAGTAAGGACACGAGCTGTGAATCAGCGGTGACGAGCGGTCAACACAGTTTGACGACACAGCATCCCCCAAGGGATGCAAGTCCTGCAGGACTTTTGTCCATTGCAGAAGAAACTTTAGCAGAGTTTCTTTCGAAGGCTACTGGGACTGCTGTTGAGTGGGTCCAGATGCCTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCACGGTTGCGCTGGCGTGGCAGCACGAGCCTGTGGTCTAGTGGGTCTTGAACCCACAAGGGTTGTGGAAATCCTCAAAGATCGGGCTTCATGGTTTCGTGATTGCCGAGCTGTTGATGTTTTGAATGTGCTGCCCACAGCTAATGGTGGAACCATAGAGCTGCTTTATATGCAGCTATATGCTTCAACAACATTGGCTCCTGCTCGTGACTTTTGGTTGTTGCGCTACACATCTGTTTTAGAAGATGGCAGCCTTGTGGTCTGTGAGAGGTCTCTTAAAAATACTCAAAATGGTCCAAGCATGCCACCTGTGCAGCATTTTGTGAGAGCAGAGATGCTTCCCAGTGGGTACTTGATAAGACCTTGTGAGGGGGGTGGTTCTATCATACACATTGTTGATCACATGGATTTGGAGCCATGGAGTGTGCCAGAAGTACTGCGTCCATTGTATGAATCATCAACAGTGATGGCTCAGAAGACAACCATGGCGGCCCTACGCCAGCTTAGACAGATATCTCATGAGGTTTCTCAGTCTAACGTCAATGGGTGGGGCAGACGGCCTGCAGCTTTAAGAGAACTGAGTCAGAGACTGAGCAGGGGTTTCAATGAGGCTCTAAATGGGTTTACTGATGAAGGATGGTCAATGATTGGCAATGATGGTGTAGATGATGTAATGATCCTGGTGAATTCATCTCCTGACAAATTAATGGGTTTAAATCTACCCTTTGCCAATGGATTTCCATCTATTAGCAATGCAGTTTTATGTGCCAAAGCATCAATGCTGTTACAGAATGTGCCTCCGGCCATTCTCCTTAGGTTTCTGCGGGAGCATAGATCAGAATGGGCAGACAACAACATGGATGCTTACTCAGCTGCTGCCATTAAAGTTGGTCCTTGTAGTTTGCCAGGATCTCTTGTTGGAAACTATGGAGGTCAAGTTATACTTCCTCTTGCCCATACTATTGAGCATGAAGAGCTTCTGGAAGTCATTAAATTGGATGGAATTGCTCATGCTGCTGAGGACACAATAATGCCGAGAGAGCTGTTTCTTCTGCAACTCTGTAGTGGGATGGATGGGAATGCTGTTGGCACTTGTGCTGAGCTTATATTTGCTCCAATTGATGCATCTTTTGCTGATGATGCCCCCCTTTTACCTTCTGGATTTCGCATTATTCCTCTTGATTATGGGAAGGAAGCCTCTAGCCCAAATCGAACCCTTGACCTTGCATCTTCTCTTGATATTGGCCCTGCTGGAAATAAGGCATCTAATGATGATGCTGGAAATTCTGGCTGTATGAGATCTGTGATGACAATGGCATTTGAATTTGCATTCGAAAGTCATATGCAGGAGCATGTAGCATCCATGGCACGACAATATGTTCGCAGCATCATATCATCTGTCCAAAGGGTGGCATTAGCTCTTTCTCCATCTCATCTGGGCTCACAGGCTGGGCTTAGGTCACCGCTTGGTACTCCTGAAGCGCAAACACTCGCGCGGTGGATTTGCAACAGTTATAGGTGCTACTTGGGAGTGGAGCTATTAAAACCTAATAATGAGGGAAATGAATCAATACTCAAGGCCTTGTGGCATCACTCAGATGCTCTACTGTGCTGCACTTTAAAGGCAACGCCGGTGTTCACTTTTGCCAACCAGGCAGGGCTTGACATGCTGGAGACTACCTTAGTTGCACTACAAGACTTGAGTTTGGAGAAAATATTTGAGGATCATGGGAGAAAGATCCTCTGTTCCGAGTTTCCTCAGATTATACAACAGGGCTTTGCTTGCCTTCAAGGTGGTATATGTGTCTCAAGCATGGGGCGGCCAGTCTCACATGAGAGAGTTGTGGCCTGGAAAGTGCTGAATGAAGAGGAGAATGCTCATTGCATCTGCTTTATGTTCGTGAACTGGTCTTTTGTTTGA 2508 0.4641 MSCKDGKIALDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEAFRLQAVNRKLSAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQNTTIASKDTSCESAVTSGQHSLTTQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCAGVAARACGLVGLEPTRVVEILKDRASWFRDCRAVDVLNVLPTANGGTIELLYMQLYASTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNTQNGPSMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVMAQKTTMAALRQLRQISHEVSQSNVNGWGRRPAALRELSQRLSRGFNEALNGFTDEGWSMIGNDGVDDVMILVNSSPDKLMGLNLPFANGFPSISNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNMDAYSAAAIKVGPCSLPGSLVGNYGGQVILPLAHTIEHEELLEVIKLDGIAHAAEDTIMPRELFLLQLCSGMDGNAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDYGKEASSPNRTLDLASSLDIGPAGNKASNDDAGNSGCMRSVMTMAFEFAFESHMQEHVASMARQYVRSIISSVQRVALALSPSHLGSQAGLRSPLGTPEAQTLARWICNSYRCYLGVELLKPNNEGNESILKALWHHSDALLCCTLKATPVFTFANQAGLDMLETTLVALQDLSLEKIFEDHGRKILCSEFPQIIQQGFACLQGGICVSSMGRPVSHERVVAWKVLNEEENAHCICFMFVNWSFV 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0369 835 Gene3D - 9 78 - -
Lele37g0369 835 ProSiteProfiles START domain profile. 148 363 IPR002913 GO:0008289
Lele37g0369 835 Pfam Homeodomain 14 72 IPR001356 GO:0003677
Lele37g0369 835 CDD START_ArGLABRA2_like 152 367 - -
Lele37g0369 835 Pfam START domain 158 366 IPR002913 GO:0008289
Lele37g0369 835 FunFam Homeobox-leucine zipper protein REVOLUTA 14 69 - -
Lele37g0369 835 Gene3D - 193 375 IPR023393 -
Lele37g0369 835 CDD homeodomain 14 74 IPR001356 GO:0003677
Lele37g0369 835 CDD bZIP 66 105 - -
Lele37g0369 835 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 10 835 IPR044830 GO:0003700
Lele37g0369 835 SMART START_1 157 367 IPR002913 GO:0008289
Lele37g0369 835 FunFam homeobox-leucine zipper protein ATHB-15 193 374 - -
Lele37g0369 835 Coils Coil 79 110 - -
Lele37g0369 835 ProSiteProfiles 'Homeobox' domain profile. 9 73 IPR001356 GO:0003677
Lele37g0369 835 SUPERFAMILY Homeodomain-like 13 77 IPR009057 -
Lele37g0369 835 SUPERFAMILY Bet v1-like 157 365 - -
Lele37g0369 835 SMART HOX_1 11 77 IPR001356 GO:0003677
Lele37g0369 835 Pfam MEKHLA domain 692 834 IPR013978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0369 Lele-ChrLele37 3096706 3103461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0369 1 787 Homeobox Transcription Factor Family AT1G52150 84.684 0.0 1392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele37g0369 START 1.8e-53 CL0209
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele43g0493 43 4481572 4491294 Lele37g0369 37 3096706 3103461 CCT
Lele44g0462 44 3488295 3496404 Lele37g0369 37 3096706 3103461 CCT
Lele37g0369 37 3096706 3103461 Lele37g0369 37 3096706 3103461 ECH
Lele37g0369 37 3096706 3103461 Lele39g1058 39 19194500 19201233 hybridization
Lele37g0369 37 3096706 3103461 Lele40g0325 40 2667799 2676387 hybridization