Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0334 ATGCCGTTGAGGAAAATGCCGTTAGAAAAAGGTGCGGAGAGGATGGCCACAGTACCAGGGCAGCTCTTGTGGGAAATCGTGAAGAAGAACAACTCTTTTTTGGTGAAGGAGTTTGGTAGGGGGACTCAGAGCGTGCAGTTCAGTAAAGAGAGCAACAATCTCTACAACATTAACTCTTTCAAGTTCTCTGGTTTGGCAAACAAGAAAACCATTACTATTCAGCCTGCTGGCAAGGATCAATCTGTGCTGCTGGCAACGACCAAGACAAAGAAGCAGAACAAGCCAGCTTCATTGCTTCATAAGTCTGTCATGAAAAAGGAGTTCAGAATGATGGCAATGGCAGTAGAGAACCAGGTGGGAGATAACTACTACAGGCCTGATCTTAAGAAGGCTGCCCTTGCGAGGTTGAGCGCCATTCATAGGAGCCTCAAAGTTGCCAAGTCTGGTGTTAAAAAGAGGAACAGACAGGCTGTGAGGATTTCTGGTAGGAAGTGA 495 0.4646 MPLRKMPLEKGAERMATVPGQLLWEIVKKNNSFLVKEFGRGTQSVQFSKESNNLYNINSFKFSGLANKKTITIQPAGKDQSVLLATTKTKKQNKPASLLHKSVMKKEFRMMAMAVENQVGDNYYRPDLKKAALARLSAIHRSLKVAKSGVKKRNRQAVRISGRK 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0334 164 Pfam Ribosomal L28e protein family 22 142 IPR029004 -
Lele37g0334 164 PANTHER 60S RIBOSOMAL PROTEIN L28 15 164 IPR002672 GO:0003735|GO:0005840|GO:0006412
Lele37g0334 164 FunFam 60S ribosomal protein L28 19 147 - -
Lele37g0334 164 Gene3D - 20 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0334 Lele-ChrLele37 2814229 2816447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0334 15 157 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 74.825 2.31e-75 220
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0334 37 2814229 2816447 Lele37g0334 37 2814229 2816447 ECH
Lele37g0334 37 2814229 2816447 Lele39g1090 39 19467044 19472800 hybridization