Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0324 ATGCTGGTCAGTTTTGAGGTTGAGGCAATGGAGTCAAAACTTGAGCTTCTCCATGGAACAATTGAAGCCACCATCTTCAATGCTACTCCCTATGCACCTGCATTTCCGTTCAATTGTATCAGAACAAATGGGAAACCTGCATATGTGACCATCAAGCTAGGAAACAAGAAGGTAGCAAAGACAAGTCAAGAACGAGATCGCGTGTGGAATCAAACCTTTCAGATCCCATGTGCTCACCCAGCAGATTCAATTATCATCCTCACATTGAAAACATCATGCTCTATATTGGGGAGATTCCATATTCAGGCTCAGAAGTTACTGAAGGAAGAAAGTTTAATCAACGGTTTCTTCCCTCTCCACATGGAAAATGGAAAACCAAATCCTCAACTCAAGCTAAGGTTTCTATTGTGGTTCAAACCAGCAGGGCTTGAACCAAGTTGGGAAAAGCTGCTAAGGGATGGGGAATTTCATGGCTTAAGGGATGCCTCGTTTCCACAAAGGTCCAATTGTCAGGTCAAGCTTTACCATGATGCTCACCATTCTTTCACTTATCAACCTCCTTTTGATCATTGTGGACCTCCAAGAAGACTATGGGAAGACGTGTATAAAGCCATTAAGGGTGCAAAGTACTTAATCTATATTGCAGGATGGTCCTTCAATCCTAAGATGGTTCTGGTCAGAGATCCTGAAACGGAAATCCCACATGCGAGAGGAGTAAAGCTTGGTGAGCTGTTAAAAAGGAAGGCAGAGGAAGGAGTGGCAGTGAGGGTGATGGTTTGGGATGATGAAACATCTTTGCCATTTATTAAGAACAAGGGTATGATGAATACCCATGATGAGGATGCTTCTGCATACTTCAAACATACAAAAGTTATATGCAGAAAGTGTCCCAGATTACACCATAAGTTCCCCACATTATTTACTCACCATCAGAAGACTATAACTGTTGATGCCAAAGCACCGAAATCTGTGAATGATAGAGAAATTATAAGTTTTGTTGGTGGGTTAGATTTATGTGATGGAAGGTACGACACAGAGCAGCATTCATTGTTTCAAACACTAAATAGCGAATCCCATTGCCATGATTTCTATCAGACAAGTATTCCAGGAGCTAGTCCTAATAAAGGAGGGCCGAGAGAGCCTTGGCATGATGCTCATGCTTGTGTTATAGGTGGTGCTGCTTGGGATGTGTTAACAAATTTCGACCAAAGATGGACAAAGCAGTGTGATCCTTCCCTTTTAGTCCCTGCAAGTGCCTTAACAAACCTCATGCCCCAAACGTTTTCAAGCATTCCTATTGAGAGGAATTGGAAAGTTCAAGTATATAGATCAATTGACCATATCTCTGCTTACCAATTGTTTAGGAAGTTTACTGTGGAGAGGAGCATTCATGATGCTTATGTTGAAGCAATCAGGCGCGCCGATAGGTTTATATACATTGAAAACCAGTATTTCATTGGAGGGTGCCATTTGTGGAACAAAGACAAGCATAGTGGAGGCAGAAATTTGATCCCCATTGAGATAGCACTCAAGGTGGTGAGTAAGATTAAAGCAAAGGAGAGGTTTGCAGTGTATATAGTGATTCCAATGTGGCCAGAAGGATTACCTGAAAGTGACACAGTTCAGGACATTCTGCATTGGACCAGAGAAACAATGGCAATGATGTATAAGTTGATTGGAGAAGCAATACAAGAGAGTGGGGAAGCAGGGCACCCAAGAGACTACTTGAATTTCTTTTGCCTAGCAAATAGGGAACAGAAGGGAGAAGGGGAGTACATGCCACCACATTCTCCTCATCCCGAAACACATTATTGGAATGCCCAAAAGAGTAGAAGGTTCATGGTGTATGTCCACTCCAAGCTCATGATAGTGGACGACCTGTACATGTTGATAGGGTCAGCCAACGTGAACCAGAGATCCATGGATGGGCAAAGAGACACGGAGATAGCCATAGGTTGCTACCAATCGCAAGACGCGGATTCTAACAACCAAGCGATGAATCGAGGCGAGATTCACGCATACAGGATGTCACTGTGGTACGAGCACAGTAGGTGCGCAGAGGAATGGTTGCTGGAGCCAGAGAGTTTGGAATGCGTTCGGCAAATGCGATCCATCGGAGATCGAATGTGGAAAATCTACAGCGGCGAAGAGATTGTGGACATGGAAGGCGTTCATCTGGTGAGCTACCCTTTGAAGGTGATGCATGAAGGTTTGGTAGAAGATGTGAATGAGTGTGAGGGACGTTTTCCTGATACAGAGTGTCCAGTGAAGGGGAAGAGATCTAAGATGCTGCCTCCTGTCGCCACCACTTAG 2313 0.4393 MLVSFEVEAMESKLELLHGTIEATIFNATPYAPAFPFNCIRTNGKPAYVTIKLGNKKVAKTSQERDRVWNQTFQIPCAHPADSIIILTLKTSCSILGRFHIQAQKLLKEESLINGFFPLHMENGKPNPQLKLRFLLWFKPAGLEPSWEKLLRDGEFHGLRDASFPQRSNCQVKLYHDAHHSFTYQPPFDHCGPPRRLWEDVYKAIKGAKYLIYIAGWSFNPKMVLVRDPETEIPHARGVKLGELLKRKAEEGVAVRVMVWDDETSLPFIKNKGMMNTHDEDASAYFKHTKVICRKCPRLHHKFPTLFTHHQKTITVDAKAPKSVNDREIISFVGGLDLCDGRYDTEQHSLFQTLNSESHCHDFYQTSIPGASPNKGGPREPWHDAHACVIGGAAWDVLTNFDQRWTKQCDPSLLVPASALTNLMPQTFSSIPIERNWKVQVYRSIDHISAYQLFRKFTVERSIHDAYVEAIRRADRFIYIENQYFIGGCHLWNKDKHSGGRNLIPIEIALKVVSKIKAKERFAVYIVIPMWPEGLPESDTVQDILHWTRETMAMMYKLIGEAIQESGEAGHPRDYLNFFCLANREQKGEGEYMPPHSPHPETHYWNAQKSRRFMVYVHSKLMIVDDLYMLIGSANVNQRSMDGQRDTEIAIGCYQSQDADSNNQAMNRGEIHAYRMSLWYEHSRCAEEWLLEPESLECVRQMRSIGDRMWKIYSGEEIVDMEGVHLVSYPLKVMHEGLVEDVNECEGRFPDTECPVKGKRSKMLPPVATT 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0324 770 CDD PLDc_pPLD_like_2 458 657 - -
Lele37g0324 770 Gene3D Endonuclease Chain A 179 425 - -
Lele37g0324 770 Pfam Phospholipase D Active site motif 616 640 IPR001736 GO:0003824
Lele37g0324 770 Pfam Phospholipase D Active site motif 306 342 IPR001736 GO:0003824
Lele37g0324 770 Gene3D C2 domain 10 138 IPR035892 -
Lele37g0324 770 PANTHER PHOSPHOLIPASE D 12 752 IPR015679 -
Lele37g0324 770 PIRSF PLD_plant 7 770 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Lele37g0324 770 Pfam C2 domain 47 119 IPR000008 -
Lele37g0324 770 Gene3D Endonuclease Chain A 426 675 - -
Lele37g0324 770 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 305 342 IPR001736 GO:0003824
Lele37g0324 770 Pfam Phospholipase D C terminal 688 759 IPR024632 -
Lele37g0324 770 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 613 640 IPR001736 GO:0003824
Lele37g0324 770 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 16 134 IPR035892 -
Lele37g0324 770 SUPERFAMILY Phospholipase D/nuclease 431 698 - -
Lele37g0324 770 SMART pld_4 613 640 IPR001736 GO:0003824
Lele37g0324 770 SMART pld_4 305 342 IPR001736 GO:0003824
Lele37g0324 770 SUPERFAMILY Phospholipase D/nuclease 155 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0324 Lele-ChrLele37 2717727 2723140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0324 39 770 Phospholipase D Gene Family (Wang group) AT1G55180 63.661 0.0 978
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0969 41 19144441 19150516 Lele37g0324 37 2717727 2723140 CCT
Lele42g0938 42 22090142 22097287 Lele37g0324 37 2717727 2723140 CCT
Lele37g0324 37 2717727 2723140 Lele37g0324 37 2717727 2723140 ECH
Lele37g0324 37 2717727 2723140 Lele39g1099 39 19563599 19568913 hybridization