Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0294 ATGGGTGCTTCAGGAAGATGGTTGAAATCCCTCATTTCTCATAAAAAGCCCTCCTCAAATGACCCTGAGAAGGTTAGTGATAAGAGTAAGAAGAAATGGAGGCTATGGAGAAGCTCTTCTGAAGGTTTTGGATTTGGGTCGTCCACGAAAAGCATGAAGAAGGTCCGGGATGCTGCATCAGAGACGTCTGATTCATCTACATTTGTTGTGGATGATTCACTTGCTTCTGCCGTGGCTTCTGTGGCAGTCCGAGCTGCTCCTAAGGATTTCATGCAAATCAAGCAGGAATGGTCTGCCGTTCGCATTCAATCTGTGTTTCGAGGTTTCTTGGCTAGACGAGCTTTGAGGGCATTGAAGGCAGTGGTGAGGCTGCAAGCAATATTTAGAGGAAGGCAAGTAAGAAAGCAAGCAGCTGTAACACTAAGGTGCATGCAAGCTCTTGTGAAAGGGCAGGCACGTCTGAGAGCAATGAATGTAAGGATGTCTCCAGAAGGGAAGGCCGTTCAGAATTTATTAGATGATTGTCGCAGACAAGCTTCTGATCCTGTTAAGCAGGCTGAGGAAGGATGGTGTGGCATTCCAGGAACTGTAGATGAATTTAAAGCCAAGATACAAATGAAGCAAGAGGCAGTCATCAAAAGGGAGAGAGCAATGGCTTATTCTCTATCTACTCAGTCACGAGTGAGTGCTAGTCCAAAATCAAGAGGAACAAAGACAGTGAACAAGAGCTTGTTGTTAGAGCAATGGATGACAGTGAAGCCATGGGAAAGCAGGTTGATGGAAGAAGGTGGTACCTATTATGACTCACCTGAAATTACTCCTCCATTGTCCAGGAAAAGCAATGAACTTGTTCAAGAACAACAACAAGGCTTAATCGAAGCAAGAAGGAATGGTGTGATTGTGAACACAACTATTTCCAATAGCTCTCTTACAACAAGAAGCCAATCGACTCTGACATCATCATCTTCAACCTCGAGTTCTGAATGCTGCACATTTGATGATAGCCCTGAGTCATCAACTTCATACACATGCATATCACAATCTGTACCATTTAGCAGCACTCTTGCGGAGGAAACAGGAGAGGAAAGGAGTGTTCATAGACCTAGCTATATGAATCTGACAGAGTCAACAAGGGCCAAACAAAGAGCTTGTGGTTATATGATGAATCTGAGTGGAGATTGTAGGAACATTTGTTCTGGTTCTGATCCGTGTGTTAATTTGTGGAAAGGTGTCTGTGCAACACCTGAAAGGTTGTCTTACCAAAAGAGAAACTCTGTGAGACAACAACAAAGGTTGGCTTAG 1302 0.4401 MGASGRWLKSLISHKKPSSNDPEKVSDKSKKKWRLWRSSSEGFGFGSSTKSMKKVRDAASETSDSSTFVVDDSLASAVASVAVRAAPKDFMQIKQEWSAVRIQSVFRGFLARRALRALKAVVRLQAIFRGRQVRKQAAVTLRCMQALVKGQARLRAMNVRMSPEGKAVQNLLDDCRRQASDPVKQAEEGWCGIPGTVDEFKAKIQMKQEAVIKRERAMAYSLSTQSRVSASPKSRGTKTVNKSLLLEQWMTVKPWESRLMEEGGTYYDSPEITPPLSRKSNELVQEQQQGLIEARRNGVIVNTTISNSSLTTRSQSTLTSSSSTSSSECCTFDDSPESSTSYTCISQSVPFSSTLAEETGEERSVHRPSYMNLTESTRAKQRACGYMMNLSGDCRNICSGSDPCVNLWKGVCATPERLSYQKRNSVRQQQRLA 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0294 433 MobiDBLite consensus disorder prediction 310 329 - -
Lele37g0294 433 Pfam IQ calmodulin-binding motif 97 116 IPR000048 GO:0005515
Lele37g0294 433 Pfam IQ calmodulin-binding motif 119 136 IPR000048 GO:0005515
Lele37g0294 433 PANTHER IQ-DOMAIN 5-RELATED 1 383 - -
Lele37g0294 433 ProSiteProfiles IQ motif profile. 95 123 IPR000048 GO:0005515
Lele37g0294 433 MobiDBLite consensus disorder prediction 1 32 - -
Lele37g0294 433 MobiDBLite consensus disorder prediction 16 32 - -
Lele37g0294 433 ProSiteProfiles IQ motif profile. 119 146 IPR000048 GO:0005515
Lele37g0294 433 Gene3D - 92 147 - -
Lele37g0294 433 SMART iq_5 117 138 IPR000048 GO:0005515
Lele37g0294 433 SMART iq_5 94 116 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0294 Lele-ChrLele37 2482981 2485162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0294 1 408 IQD Protein Family AT1G72670 43.508 7.60e-90 277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0294 37 2482981 2485162 Lele39g1131 39 19806236 19810826 hybridization
Lele37g0294 37 2482981 2485162 Lele40g0263 40 2096905 2103857 hybridization