Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0288 ATGGCTTCCTCTTCTTCAAGCTCTGGCTCTGGGCCAAATGCTCCAAGAAATTACGATGTGCTTGTGAGTTTTAGAGGTGAAGAAACCCGCAACAACTTCACTAGTCATCTTCATGCTGCTCTCAACCGAGTTTTCCTTGTGGCCTTTCGTGATGATAAGCAGCTTGAGAAAGGTGATGAAATAGCACCATCACTTACCCAAGCGATCAAGGATTCGAGTGTATCTGTAGTAGTCTTCTCAGAATATTATGCTTCCTCAAGATGGTGTCTTGATGAACTCGCCCAGATCATGCAATACAGGAAGGATGCGGGCCAGTTTGTGATACCCATCTTCTACAAAGTTGACCCCTCACATGTTCGAAACCAGACCGGAGCTTATAAGAAGGCATTCGAAAAACATGAGAAAGATTTCAGTAGGAATGACCCGGACAAGGTGAACAGATGGAAAGCTGCTCTTTCTGAAGCTGGCAATTTAAGCGGCAGGCACTGCCAATCCTCCACGGATGAATCCAATTTAGTTCACGAAATTGTGGCCGATGTCTACACAAAACTGAAACACATACATAATGGACAATGTACATTAAAGGATGTAATTGGAATTGATGAAATGATTAAAACCATTGAAGAGTTACTGGAAAAATTTCACAAAGTTGGAATATGGGGGATGGGCGATGTTGGTAAGACCACAATGGCAAGAGCTGTATTTGCCAAATTATCTCCTCGTTATGACAGTTGCTGCTTCTTACAAAATGTAAGGGAAGAAACAGAAAAAAATGGATTAGAACGTGTGCGTGACTCTCTTGTCTCGGAGCTACTAAGGGAAGATATGCAAAGGAACCCATCAAATGATTTAAGAAAGGCCGCATTTGTTGAAAGAAGGCTCCGTCGTAAAAAAGCCTTGGTTGTGCTTGATGATGTTGATAGTTCTAAGCAAGTAAAGGAGCTGCAAGATAACACATGCAATTTCTTGGGAGAAGGCAGTAGAGTTATTATAACAACAAGAAATAGTAAATTGCTTCGGTCATACAGTTATGAAATACATGAAGCCAAGGGATTGAGTTATTACAATTCGCGTCGACTTTTCATCCGCAAGGCTTTCGGATCAGACCATCCAGAACATGGATATGAACAGCTCATACAAGGGTTTGTAGATTATACCCAACACAATCCCCTAGCTTTAGAAGTTCTGGGTTCATATGTTCACTCTGAAAATAAAAGGTTATGGAATGGCTTATTGCAAAAACTACGAGGAGGGAGTCCAAATGGCGAAATTCAAAAGGTGTTAAGATTGAGTTATGATGTATTAGACTATGAAGAGAAGCAAATTTTCCTAGAGATTGCATGTTTCTTAAAGGGTGAAAGTGAAGAATTTGTAGAACAGCTATTAGAGAGCTATGAATTCCATCCAACTGTTGGCATACAAACCCTTAAAGATAGGGCTCTTATTGTCACGATCAGTGGGCGTGTTGAGATGCATGACTTATTACAAGAAATGGGTTTAGAAATTGTTCGTGAGGAGAGTATGAAGAAACATGGAAAAAGGAGTAGATTATGGGATCCTGGCGAAATCTATGAAGTACTGAAAAATTGTGAGGAGCACAGAATTTAG 1608 0.4055 MASSSSSSGSGPNAPRNYDVLVSFRGEETRNNFTSHLHAALNRVFLVAFRDDKQLEKGDEIAPSLTQAIKDSSVSVVVFSEYYASSRWCLDELAQIMQYRKDAGQFVIPIFYKVDPSHVRNQTGAYKKAFEKHEKDFSRNDPDKVNRWKAALSEAGNLSGRHCQSSTDESNLVHEIVADVYTKLKHIHNGQCTLKDVIGIDEMIKTIEELLEKFHKVGIWGMGDVGKTTMARAVFAKLSPRYDSCCFLQNVREETEKNGLERVRDSLVSELLREDMQRNPSNDLRKAAFVERRLRRKKALVVLDDVDSSKQVKELQDNTCNFLGEGSRVIITTRNSKLLRSYSYEIHEAKGLSYYNSRRLFIRKAFGSDHPEHGYEQLIQGFVDYTQHNPLALEVLGSYVHSENKRLWNGLLQKLRGGSPNGEIQKVLRLSYDVLDYEEKQIFLEIACFLKGESEEFVEQLLESYEFHPTVGIQTLKDRALIVTISGRVEMHDLLQEMGLEIVREESMKKHGKRSRLWDPGEIYEVLKNCEEHRI 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0288 535 PRINTS Disease resistance protein signature 293 307 - -
Lele37g0288 535 PRINTS Disease resistance protein signature 386 400 - -
Lele37g0288 535 PRINTS Disease resistance protein signature 216 231 - -
Lele37g0288 535 Gene3D - 13 184 IPR035897 -
Lele37g0288 535 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 160 IPR035897 -
Lele37g0288 535 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 444 IPR027417 -
Lele37g0288 535 Gene3D - 352 436 IPR042197 -
Lele37g0288 535 ProSiteProfiles TIR domain profile. 16 184 IPR000157 GO:0007165
Lele37g0288 535 SUPERFAMILY "Winged helix" DNA-binding domain 423 528 IPR036390 -
Lele37g0288 535 Pfam NB-ARC domain 207 415 IPR002182 GO:0043531
Lele37g0288 535 Gene3D - 185 348 IPR027417 -
Lele37g0288 535 SMART till_3 17 158 IPR000157 GO:0007165
Lele37g0288 535 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 527 IPR044974 GO:0006952
Lele37g0288 535 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 186 - -
Lele37g0288 535 Pfam TIR domain 17 196 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0288 Lele-ChrLele37 2424881 2427661 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0288 13 529 WRKY Transcription Factor Family AT4G12020 30.740 1.48e-57 206