Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0280 ATGAACACAATAACAGGAATTTCAACAGTTTTTCAGATTACTTCATCCACTTATTTTTTCCCTGCCTTGCAGTGGCAGTGCCTATTCTGCAATTTGACGTTGTTGCAAATGAATTACTCAGGCTTTCCACTGATGTACAAGAATTCTTACCCTCATGTGGTGAAGTTTGACACTGTTTTTAAGAGGCATTTATGCTTATGGCACAATCTGGGGCTGGGAAAACAGCAACTTTTAGCTCTGGAATTTGGCAGCAACTTGATTATGGGGAACAAGCTAAGTGTACTTGAAGATCAACGAATTCTCCAATCTGGTGTTCATGTTGTTGTTGGCACTCCCGGTTTTGATATGCTCCAAAGGAAATCTCTTCGATCAGATCACATAAAGATGTTTGTCTTAGATGAAGCTGATGAAATGCTTTCACGGGTTTCAAGGACCAGGTATGAGATTACTAATATAGTTTGGTTGTTGGTATTGCAGATCTATGACATATTCCAGCTACTGCCTGGTAAAATTCGGGTTGGGGTGTTCTCTGCTACAATGACATTAGAAGCCCTTGATCTTACAACGAAGTTCATGAATAAACCATTGGTTGTAAACTATGATCTGCCAACTCAACCTGAGGATTATCTTCATAGGATTGGAAGAAGTGGAAGGTTTGGAAGAAAAGGTGTTTCTATAAACTTCGTTACTAATGATGATTTGAAAATGTTTTCTGATATTCAGAAGTTCTATAATGTTACCATAGAGGAGCTGCCATCAAATGTTGCTGATTTGCTTTGA 780 0.3859 MNTITGISTVFQITSSTYFFPALQWQCLFCNLTLLQMNYSGFPLMYKNSYPHVVKFDTVFKRHLCLWHNLGLGKQQLLALEFGSNLIMGNKLSVLEDQRILQSGVHVVVGTPGFDMLQRKSLRSDHIKMFVLDEADEMLSRVSRTRYEITNIVWLLVLQIYDIFQLLPGKIRVGVFSATMTLEALDLTTKFMNKPLVVNYDLPTQPEDYLHRIGRSGRFGRKGVSINFVTNDDLKMFSDIQKFYNVTIEELPSNVADLL 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0280 259 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 99 259 IPR001650 -
Lele37g0280 259 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 131 139 IPR000629 -
Lele37g0280 259 SMART ultradead3 28 212 IPR014001 -
Lele37g0280 259 Gene3D - 72 194 IPR027417 -
Lele37g0280 259 Pfam Helicase conserved C-terminal domain 196 220 IPR001650 -
Lele37g0280 259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 98 235 IPR027417 -
Lele37g0280 259 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 40 195 - -
Lele37g0280 259 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 198 IPR014001 -
Lele37g0280 259 Pfam DEAD/DEAH box helicase 95 183 IPR011545 GO:0003676|GO:0005524
Lele37g0280 259 Gene3D - 195 257 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0280 Lele-ChrLele37 2362676 2364850 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0280 170 259 Eukaryotic Initiation Factors Gene Family AT1G72730 60.000 4.49e-31 117