Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele37g0263 | ATGGAAGTTGAACTCAACGCAATAACAACTTCCGGCGTAATGAGCCTTCTTTACGAGGCTGCCTACAGTGGGGATGTGTCAAAGCTGAATTCATTGTTACAACAGTGCCCACATATCTTGCACAAAACTTCTCAAACTACCTTCAACGAAACTCCTTTACACGTATCATGTTTGCGTGGCCACCCTGAGTTCACCAAGCAACTTCTCACTCTCAAACCTAATCTAGCTCTTGAGGTAGACTCCTCACGAATGACAGCTCTCCACATGGCTTCTGCAGAAGGTCACATCGACACCGTGAAGGAACTGCTTAGAGTTAACAGTGAGCCATGCTTGTTTCCTGATGAAGAGGGAAGAATTCCACTACACTATGCAGTTATGAGAGGGAGGAAAGAGGTTGTCGAAGAGCTTATCAAAGCGAAGCCTGAATCTCTCATTTTTCAATGTAAAGGAAAATCTGTTTTCCACTTGTGCGTCACATACAACCATCTACAGACTCTCATAGCTTTGGTGGAATCAGAGTCTGCTATTAATAATGGCGAGTTTCTCAGTTTCACAAGCTGTGATGATGCTGGAAACACTGTTCTCCATTTGTCTATCATGTTGAAGAGAGTTGAGGTGGTAAGCTATCTCCTGACAGTTCCAGAAATAAGAGAAATAGCAAATGTGGAGAACAATATAGGCTTTACAGCCCAGGATATGTTGGAACAAAGTCCAAAAGACTTCAAAAGCTGTGAAATACAACACATGTTGACAATGGCCGAAAGGGAAGGATTTGAATTTGATCATCCACACCCAACACCTGTAACATCTACTGATGATGTGATGATCAGATTCGAGAAAGGGAAGGGATTTGAAAGTGAAAAGACTGTGGAAATTAAGGCAAATAGGGAAGGGCGAGATGAGTGGACGAACGAGATTAAACTAAGATAG | 930 | 0.4258 | MEVELNAITTSGVMSLLYEAAYSGDVSKLNSLLQQCPHILHKTSQTTFNETPLHVSCLRGHPEFTKQLLTLKPNLALEVDSSRMTALHMASAEGHIDTVKELLRVNSEPCLFPDEEGRIPLHYAVMRGRKEVVEELIKAKPESLIFQCKGKSVFHLCVTYNHLQTLIALVESESAINNGEFLSFTSCDDAGNTVLHLSIMLKRVEVVSYLLTVPEIREIANVENNIGFTAQDMLEQSPKDFKSCEIQHMLTMAEREGFEFDHPHPTPVTSTDDVMIRFEKGKGFESEKTVEIKANREGRDEWTNEIKLR | 309 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele37g0263 | 309 | SUPERFAMILY | Ankyrin repeat | 17 | 233 | IPR036770 | - | |
| Lele37g0263 | 309 | ProSiteProfiles | Ankyrin repeat profile. | 116 | 138 | IPR002110 | GO:0005515 | |
| Lele37g0263 | 309 | ProSiteProfiles | Ankyrin repeat region circular profile. | 116 | 138 | - | - | |
| Lele37g0263 | 309 | Pfam | Ankyrin repeats (3 copies) | 17 | 106 | IPR002110 | GO:0005515 | |
| Lele37g0263 | 309 | Pfam | Ankyrin repeats (3 copies) | 121 | 211 | IPR002110 | GO:0005515 | |
| Lele37g0263 | 309 | Gene3D | - | 11 | 247 | IPR036770 | - | |
| Lele37g0263 | 309 | PANTHER | HOMEOBOX PROTEIN WARIAI | 23 | 251 | - | - | |
| Lele37g0263 | 309 | SMART | ANK_2a | 190 | 219 | IPR002110 | GO:0005515 | |
| Lele37g0263 | 309 | SMART | ANK_2a | 48 | 77 | IPR002110 | GO:0005515 | |
| Lele37g0263 | 309 | SMART | ANK_2a | 116 | 145 | IPR002110 | GO:0005515 | |
| Lele37g0263 | 309 | SMART | ANK_2a | 82 | 111 | IPR002110 | GO:0005515 | |
| Lele37g0263 | 309 | SMART | ANK_2a | 149 | 178 | IPR002110 | GO:0005515 | |
| Lele37g0263 | 309 | SMART | ANK_2a | 12 | 42 | IPR002110 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele37g0263 | Lele-ChrLele37 | 2085699 | 2088255 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele37g0263 | 24 | 250 | Miscellaneous Gene Families | AT4G10720 | 26.609 | 4.09e-23 | 96.7 |